Gordonia sp. X0973: HUN08_10705
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Entry
HUN08_10705 CDS
T10819
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
goo Gordonia sp. X0973
Pathway
goo03030
DNA replication
goo03430
Mismatch repair
goo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUN08_10705
03430 Mismatch repair
HUN08_10705
03440 Homologous recombination
HUN08_10705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goo03032
]
HUN08_10705
03400 DNA repair and recombination proteins [BR:
goo03400
]
HUN08_10705
Enzymes [BR:
goo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUN08_10705
DNA replication proteins [BR:
goo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HUN08_10705
DNA repair and recombination proteins [BR:
goo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HUN08_10705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
UVR
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
QKT07610
LinkDB
All DBs
Position
2194453..2196438
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AA seq
661 aa
AA seq
DB search
MDSDRTAEQLSFADVGLPGVGLPGPANRDRAGRSRGHGSHRRPPTAAEAAEMSASVHGGI
DQSLATTPFVVVDLETTGGSPERDAITEIGAVRICGGEVVGEFATLVDPGRPIPTEIVTL
TGITEAMVVAAPTIGEVLPAFLEFARGSVLVAHNSRFDLGFLTASANRLGLDWHFPATLC
TVALARRVLTREEAPAVRLSALAALFDATTTPTHRALDDARATVDVLHGLLERIGNRGVG
TFAELLDFLPRATPAQRAKRHLADRVPRAPGVYLFRGCGDEVLYVGTAVDLRRRVRSYFA
GDSRPRIAEMVALSSRVDHVVCAHDLEAGVRELRLLAAHNPAYNRRSTQPRRGWWVSLTE
ERFPRFTVGRSARPEPGPLGEPTSIGPIPQRATAQAVADALTRATGLRSCTTRLGARRDY
HWCPPHSVSPTTRPVSPTAGPVRGPSSSTAVPATRAGPGDCAAASPIPESVTDYLPRVRA
ALDVVAGRSDAALHELAATVAAAAEAEHFETAARHRDSLAAVVAALARCHRLRALCDLEQ
FVVARPGPAGGWRFAVVRHGRLAGAGTADAHTPPMPVVEAVIAAAETVIPSAGPLHGAAP
EEAALVYRWITAADARIVDASGGLALPRFSACGWEGWAVRARAARSRETTDGRSREPAGH
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggactccgaccgcaccgccgagcagctgtcgttcgccgacgtgggtttgcccggtgtc
gggctgcccgggccggcgaaccgcgaccgggccggccggtcgcgcgggcacggatcgcac
cgccgaccgccgaccgccgccgaggcggcggagatgtcggccagcgtccacggcggaatc
gaccagtcgctggccaccacgccgttcgtcgtcgtcgacctggagaccaccggcggcagc
ccggaacgtgacgcgatcaccgagatcggcgcggtgcggatctgcggcggcgaggtcgtc
ggagaattcgcgacgctggtcgacccgggacgtccgatcccgacggagatcgtgacgctg
accgggatcaccgaggcgatggtcgtcgcggcacccacgatcggcgaggtcctgcccgcc
tttctcgagttcgcccgcggcagcgtgctcgtcgcacacaactcccgcttcgacctcggc
ttcctcaccgcgtcggcaaaccgcctcggactcgactggcacttccccgcgacgctgtgc
accgtggcgctggcgcgccgcgtcctgacccgcgaggaggcccccgctgttcggctgtcg
gcgctggccgcgctcttcgacgcgacgacgactccgacgcaccgggccctcgacgacgca
cgggcgacggtggacgtcctgcacggcctgctcgaacgcatcgggaaccggggcgtcggc
acctttgccgaactgttggacttcctcccgcgggccacccccgcgcaacgggccaaacgc
catctcgccgaccgcgtgccgcgcgcgccgggtgtctatctgttccgcggatgcggcgac
gaggtgctgtacgtcggcaccgcggtggacctccgccgccgggtccggtcctacttcgcc
ggggattcccgcccccggatcgcggagatggtggcgttgtcgagcagggtcgaccacgtg
gtctgcgcccacgacctggaagccggggtccgcgaactgcggttgctcgccgcgcacaac
cccgcctacaaccggcgctcgacccaacccaggcgcggctggtgggtctcgctcaccgag
gagcgcttcccgcgcttcaccgtcggccggtccgcgcgtccggagcccggcccgttgggc
gagccgacatcgatcggaccgatcccgcagcgggccaccgcacaggccgtggccgatgca
ctcacgcgagcgaccggtctgcggtcctgcaccacccgcctgggcgcgcgccgggactac
cactggtgcccgccccactccgtatctccgacgacgagaccggtatctccgacggcgggg
ccggtgcgcgggccaagttcctcgactgccgtcccggcgacccgggccggtcccggcgac
tgcgccgcggccagcccgattcccgagtcggtgaccgactacctcccccgggtgcgcgcc
gccctggacgtcgtcgcgggacgctcggacgccgcactgcacgaattggccgcgacggtc
gccgcggccgccgaggccgagcacttcgagaccgccgcgcgccaccgcgacagtctcgcc
gcggtggtggccgcactcgcccggtgccaccggctccgggcgctgtgcgacctcgagcag
ttcgtcgtggcccggcccgggcccgccggcgggtggcggttcgcggtggtccgccacggc
cggctggctggcgcgggtaccgcggacgcacacaccccgccgatgcccgtcgtcgaggcc
gtgatcgcggccgcggagacggtgatcccctccgccgggccgctccacggcgcggccccc
gaggaggccgcgctcgtctaccgctggatcaccgcggccgatgcccggatcgtcgacgcg
tcgggcggcctggcactgccccggttcagcgcctgcggctgggagggatgggccgtccgg
gcccgtgcggcgcggagtcgggagactaccgacgggcgaagccgagaacccgcggggcac
cgatga
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