Gordonia sp. X0973: HUN08_13425
Help
Entry
HUN08_13425 CDS
T10819
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goo Gordonia sp. X0973
Pathway
goo03420
Nucleotide excision repair
goo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUN08_13425
03430 Mismatch repair
HUN08_13425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goo03400
]
HUN08_13425
Enzymes [BR:
goo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUN08_13425
DNA repair and recombination proteins [BR:
goo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUN08_13425
MMR (mismatch excision repair)
Other MMR factors
HUN08_13425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QKT08075
UniProt:
A0AA45GAQ2
LinkDB
All DBs
Position
complement(2697121..2700495)
Genome browser
AA seq
1124 aa
AA seq
DB search
MTEPIVEPAADPIPATSIAAALGLPRPTPEQIAVIEAPLEPVLVVAGAGAGKTETMAARV
VWLVVNRLAGPEEVLGLTFTRKAASELGARIRRRLSALSGAAVLADWDPDGSLRTRLRNA
DPEISTYHAYAGRLIADYGLLLPVEPSSTLLSETELWQLAFSVVANYSGELATRKVPTGV
TEAVLKLYSDSAEHLVGLDDLTRACQRLYDLVDTLPKGPRQNDAPSAKMRDIQAVIDERR
ALLPLIAELGEQMREQSALDFGSQMSLAARLVTEHPEVATAERASFRAVLLDEYQDTGHS
QRVLLRALFGGRGNAAVAVTAVGDPIQSIYGWRGASAANLPRFASDFPRPDGSPARRFEL
LTSWRNGVHALRLANAASEELRRAGIPVSVLRARPEAPDGSVALALTETVLDERAWIARR
IAQRYDAAADAGAPPPTTAILVRRNEDSAPLAAELEALGIPAEVVGIGGLLHVPEIEDIV
AMLRLMADPLAGSAAMRLLTGARWQLGAGDLAALWKRARELAVRGRVADMPLDTAEQLAA
ALAASVPDELVDDAGIADALVDPGDPSRYSADGFARIRRFGAQLDQLRRRIGQPLPELVA
DVEQTIGVAVEAQIRARRMRGATTGREHLDAFAGYVADYADKAGATLPGLLAFLDTAETI
EKGLEPGRIEVAEQRVQILTVHAAKGLEWDVVAIPHVCGGIFPSGRSDGTWLGSVRELPA
ELRGDLADAGGEGFPRLDLTGLADRKELETALDEHRDAIAKRRLEEDRRLLYVALTRARE
TLFISAHHWSMGSTKPRAVSEFYAELAGIVTEAIANPAVDATGMTIDVAAPEPDDDAVNP
LAAHVVTAAWPADRLGDRRAAADRAAALVLDRITARDQPSLFDEPSRAEESDPDLADPDV
AQWAAEVDVLLDEHSRVNQAGVEVALPTHLSVSQLVELDTDEATFAQRLRRPVPFKPNPM
ARRGTAFHAWVERRFGATRLLDIDELPGAADESATPDQELTELIARFEASRWAMRTPVEV
EVPFETVIGSTVVRGRIDAVFNEPPGVDGEPRWIVVDWKTGAVPEPAKRESMVVQLAAYR
VAWAKLVGARPDQVRAAFHYVRSDYTLEPDDLPDSAALAGMLAR
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccgatagtcgagccggcggcggatccgatccccgccaccagcatcgcggcg
gcgttgggtctgccgcgcccgacgccggaacagatcgccgtcatcgaggcaccactcgag
ccggtcctcgtcgtcgccggggccggtgcgggcaagaccgagacgatggcggcgcgcgtg
gtgtggctcgtcgtcaaccggctggccggcccggaggaagtcctcgggctgacgttcacc
cgcaaggcggccagcgagctgggcgcgcggatccgtcggcgcctctccgctctgtcgggc
gccgcggtgctcgccgattgggatcccgacggttcgctgcgcacccgcctgcgcaacgcg
gaccccgagatcagcacctaccacgcctacgccggccgactcatcgccgactacggcctc
ttgctgccggtggagccgtcctcgacgttgctgagcgagaccgagctgtggcagctggcg
ttctcggtcgtcgcgaactattccggcgagctcgcgacgcgcaaggtaccgaccggggtc
accgaggccgtgctcaagctgtactccgattcggccgaacacctcgtcggcctcgacgac
ctgacacgtgcgtgccaacgcctctacgacctcgtcgacacgctgcccaaggggccgcgg
cagaacgacgccccgtcggccaagatgcgtgacatccaggcggtgatcgacgagcggcgc
gccctgctgcccctgatcgccgagctgggggagcagatgcgggaacagagcgccctcgat
ttcggatcgcagatgtcgttggcggcccgcctcgtcaccgaacatccggaggtcgcgacg
gccgagcgcgcctcgttccgtgccgtgctgctcgacgagtaccaggacacgggtcactcg
cagcgcgtgctgctgcgggcgctgttcggcgggcggggaaacgcggccgtcgcggtgacc
gcggtcggcgacccgatccagtcgatctacgggtggcgcggcgcgtcggcggccaacctg
ccgcgcttcgcgtcggatttcccgcggcccgacggcagccccgcgcggcgcttcgaactg
ctgaccagctggcgcaacggcgtacacgcgctccggctggccaacgcggcgtccgaagag
ctgcggcgcgccggcatcccggtgtcggtgctgcgcgcccgcccggaggcgcccgacggt
tcggtggccctggccctgaccgagacagtgctcgacgagcgcgcgtggatcgcccgacgg
atcgcgcagcgctacgacgcggccgccgacgcgggagcgccaccgccgaccacggccatc
ctggtgcggcgaaacgaggactccgcgccgctggccgccgagttggaggccctgggcatt
ccggcggaggtcgtcggcatcggcggcctgctgcacgtcccggagatcgaggacatcgtc
gcgatgctgcggctgatggccgacccgctcgccggcagcgccgcgatgcgcctgctgacc
ggggcgcgctggcagcttggtgccggtgacctggcggccctgtggaagcgggcgcgggaa
ctcgccgtgcgcggccgtgtcgccgacatgccgctggacaccgcagaacagctcgccgcc
gccctcgccgcatcggtacccgacgaactggtcgacgacgcgggcatcgccgacgccctc
gtcgacccgggcgacccgtcgcgatacagcgccgacggattcgcccgcatccgccgcttc
ggagcgcagctggaccagttgcggcgacggatcggccagccgctgccggaactggtcgcc
gacgtggagcagacgatcggagtggcggtggaggcgcagatccgggccaggcgcatgcgc
ggcgcgaccaccggacgcgagcatctcgacgccttcgccggctacgtcgccgactacgcc
gacaaggccggggccaccctgcccggtctgctggccttcctcgacaccgcggagaccatc
gagaaggggctcgagcccggccgcatcgaggtcgccgaacagcgcgtccagatcctcacc
gtccacgccgcgaagggactcgaatgggatgtcgtggcgattccgcacgtctgtggcggc
atcttccccagcggccggtcggacgggacgtggctcggtagcgtccgcgaactgcccgcc
gagttgcgcggcgacctcgccgacgcgggcggcgagggttttccgcgcttggacctcacc
ggattggccgaccggaaagaactggaaacggcgctcgacgagcatcgcgatgccatcgcc
aagcgtcgactcgaggaggaccgccgcctgctctacgtcgcgctgacccgggcacgcgag
acgctgttcatctcggcgcaccactggtcgatggggtcgaccaaaccgcgtgccgtttcg
gagttctacgccgaactcgccggcatcgtcacggaggcgatcgccaatccggccgtcgac
gccaccggcatgacgatcgacgtggccgcacccgaaccggacgacgacgcggtgaacccg
ttggccgcccacgtcgtgaccgctgcctggcccgccgaccggctgggcgaccggcgcgcc
gccgccgatcgggccgccgcgctggtactcgaccgcatcaccgcgcgcgatcagccgtcg
ctgttcgacgagccgagccgcgccgaggaatccgatcccgacctcgccgacccggatgtc
gcgcagtgggccgccgaggtcgacgttctgctcgacgagcactccagagtcaaccaggcg
ggggtcgaggtggcgctcccgacgcacctctcggtgagccagctcgtcgaactcgacacc
gacgaggcgaccttcgcccagcggctgcgccgaccggtgccgttcaaaccgaatccgatg
gcccggcgtggcaccgccttccacgcgtgggtggagcgacgcttcggggcgaccaggctc
ctcgacatcgacgagttgccgggcgccgccgacgagtcggccacccccgaccaggagctg
accgagctgatcgccaggttcgaggcgtcgcgctgggcgatgcgcacccccgtcgaggtc
gaggtgccgttcgagacggtcatcggctcgacggtcgtccggggccggatcgacgcggtg
ttcaacgaaccgcccggggtcgacggcgagccgcggtggatcgtcgtcgactggaagacc
ggggcggtgcccgaaccggcgaagcgcgaatcgatggtcgtccagctcgccgcctatcgc
gtcgcctgggccaagctggtcggcgcgagacccgatcaggtgcgggccgccttccactac
gtgcggtcggattacacgctcgaacccgacgacctgcccgactcggcggcactcgccggc
atgctcgcccgatag
DBGET
integrated database retrieval system
