Gordonia sp. X0973: HUN08_16110
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Entry
HUN08_16110 CDS
T10819
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
goo Gordonia sp. X0973
Pathway
goo00550
Peptidoglycan biosynthesis
goo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
goo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUN08_16110 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
goo01002
]
HUN08_16110 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
goo01011
]
HUN08_16110 (dacB)
Enzymes [BR:
goo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HUN08_16110 (dacB)
Peptidases and inhibitors [BR:
goo01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
HUN08_16110 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
goo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
HUN08_16110 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QKT09284
UniProt:
A0AA45JKV4
LinkDB
All DBs
Position
complement(3257603..3259087)
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AA seq
494 aa
AA seq
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MTSTATAVPLVGRHQTAQTILFSCSGPEPTRDSTRRWSVADTGKRGGAVRWALVALLVVA
LVAGGGFVAKKTVWAGEKTPDGTPPRPELVTPAPQILPVEANAPIPTATGLTMALAKVSV
SPDLGELTGQVSDPLTGAVLWEKNPGRPLIPASNAKILTAAAALLGMPQDRRLTTTVVAG
ENGQIILRGAGDPTLSGQPAAAETFFTDAPRIADLAQQIRAAGIKPTSVAVDLSLFSGSS
MDKTWDRRDIAGGDIAPIKSLMLDAGRLDPLDEFSPRTPDPAIAAGKALAKALGVDAPVK
QAKAADGAKVVAQVRSAPLATRVNDMMRYSDNVLAEALSIELSLSAGGPGTLAGGADAVR
KTLADKGFDTSGVTLHDTSGLSYANRVPARVLNDMMSGIAGSRYPQLRVLLDGLPVAAGT
GTLAERFDPRKTSGAGWVRAKTGTLTGVSSLTGIVQTVDGRVLSFALMSNGTSPDVARPA
LDAVVGKIRDCGCR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacggccacggcggttcctctcgttggtcggcaccagacggctcaaacgata
ctgtttagctgtagcgggccggaaccgacccgtgattcgacgcggaggtggtcagtggcc
gacacgggcaagcggggcggcgcggtgcgctgggccctggtggcattgctggtggtcgca
ctcgtcgccggtggcggcttcgtcgcgaagaagaccgtgtgggcgggggagaagacgccc
gacggcacgcccccgcgccccgaactggtgacccctgcgccgcagatcctgcccgtcgag
gcgaatgccccgatccccaccgcgaccgggctgacgatggcgctggccaaggtgtcggtc
tcccccgacctcggtgaactcaccggccaggtctccgacccgctgaccggagcggtgctg
tgggagaagaacccgggccgcccgctcatccccgcgtcgaacgccaagatcctgaccgcg
gcggccgcactgctcggtatgccgcaggaccgccgcctgaccacgacggtggtcgcgggc
gagaacggtcagatcatcctgcgcggggccggcgacccgaccctgtccgggcagcccgcc
gccgcggagaccttcttcaccgacgcgccgcgcatcgccgacctggcccaacagattcgc
gccgccggcatcaagccgacctcggtggccgtcgacctctcactgttcagcggatcgtcg
atggacaagacctgggaccgccgcgacatcgccggcggtgacatcgcaccgatcaagtcg
ctgatgctcgacgcgggacgcctcgacccgctcgacgagttctccccgcgcacccccgac
ccggcgatcgccgcgggcaaggcgctggccaaggcgctcggcgtcgacgcgccggtgaag
caggcgaaagccgccgacggcgccaaggtcgtcgcgcaggtgcgctcggcgccgctggcg
acgcgcgtcaacgacatgatgcggtactcggacaacgtcctggccgaagcgctctcgatc
gaactgtcgctgtccgcgggcggacccggcaccctggccggcggggccgacgcggtgcgc
aagacactggccgacaagggattcgacacctcgggggtcaccctgcacgacacctcgggc
ctctcctacgcgaaccgggtgcccgcccgcgtcctcaacgacatgatgtccggcatcgcc
ggcagccgctacccacagctgcgcgtcctgctcgacgggctgccggtggcggccggcacc
ggcacactcgccgagcgcttcgacccgcgcaagacctcgggggccgggtgggtgcgcgcc
aagaccgggacgctgaccggggtcagttcgctgaccggcatcgtgcagaccgtcgacgga
cgggtgctgtccttcgcgctgatgtccaacgggacatcgcccgacgtcgcccggcccgcg
ctcgacgccgtcgtcggcaagatccgcgattgcgggtgtcggtga
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