Gordonia sp. X0973: HUN08_17250
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Entry
HUN08_17250 CDS
T10819
Name
(GenBank) DEAD/DEAH box helicase
Organism
goo Gordonia sp. X0973
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Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SWIM
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QKT08753
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All DBs
Position
complement(3511981..3515487)
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AA seq
1168 aa
AA seq
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MSSYPPLAVNLGQLRRDFDAGSIQRGRDYAAKGRIMNRRWSDDGLRLRGKCVGTGQVYDV
DVDFQPDHRGRDLVGAFCSCPVGYYCKHAVALLLVESAEPSDGVDGAPPAPPWRSVLGAL
TSDAPSSEMALAGVAEPIGIQFDLPPGTRYVQHPAPVIALVTVGKSGRWVKTGISWTAVT
NVDRMAASLFTPSRAGFEMERYDADQLRGVRAVARAFASNYQAMSGNSIALSVAPRDVWD
LLAQAHATGVVLVAGPTLGVERVELIESSGVGLAVSKAAGGVEVKTFVHVNGQPYSGGEV
GLIGAPHPHGMFSFSGAGAGSDSERAQSGAGAGSVMLIGRFESPGNDQGLTRLLSAPAMF
IPDDEVADFATEVVPSLPASLPVLVDDDALVKPTIDGPFALLVVDLNEQGARVVWRTAYD
VNGKCKTVDEKTPALAYRDADAEWRALAGAQDAMRTVAAVCARWRNQAIHYLQQEMRRGA
VGTHAEVVRYIDELASAPTVPDAARLGDVDLLRRVYSYSPIDAAVLCHEVVPVLREHGVR
VEVHGDADRFRAAQGEPDITLSADDGGANDWFNLHVRVEVDGVVVPLDRLIVELNTSSTH
MLLDDGTYFSLDHPALARLAELLGEARALGEIEGSAVRRDSYNATLWEELLSLGVVDGDL
ALWHERMRRLAAADLPEPGEPPATLRADLRDYQLDGYNWLKFLWDNQIGGILADDMGLGK
TVQALSLIASALDEQPQSRFLVIAPTSVVGNWVREAEKFLPSAPAVAVGSPRADGPIVEQ
VGDARIVVTSYTLFRLQFEVFDGYPWAAVFFDEAQFVKNHNGKTHQCARRINAGMKVAMT
GTPMENSLMELWALLSVGAPGLFPSPRAFTDFFRKPIESGQAGDRLALLRRRIKPVMLRR
TKDQVVKDLPPKQEQVLALDLHPRHERIYQTRLNRERQKVLGLLGDWEKNRFEIFRSLTM
LRQLALHAGLVDEKDAGVASAKIDHLAEQLPELIAEGHSALVFSQFTGFLALVRERLDAD
GIAYAYLDGTMTAKARAAEVARFTDGEVKVFLISLKAGGFGLNLTEADYCFVCDPWWNPA
AEAQAVDRAHRIGQTRPVTVYRLVSAGTIEENVIALQDRKRELFNAVVDDGDLFGTGITE
GDIRALLGEEFPQSSGNLAIEGALPSNP
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtacccacccctggccgtcaatctcggccagctgcgtcgcgacttcgacgcc
gggagcattcagcgtgggcgcgactacgcggccaagggccgcatcatgaaccggcggtgg
tccgacgacgggctgcggttgcgcggcaagtgcgtcgggacgggccaggtctacgacgtc
gacgtcgacttccagcccgatcaccggggccgcgacctcgtcggcgccttctgcagctgt
ccggtcgggtactactgcaaacatgccgtcgcgctgctgctcgtcgagtcggccgagccg
tcggacggggtcgacggcgccccacccgctccgccgtggcggtcggtgctcggtgcgctg
acctccgacgcgccgtcgtcggagatggctctggccggagtggccgagcccatcggcatc
cagttcgacctgccgccgggcacgcgctacgtccagcaccccgcgcccgtcatcgcgctg
gtcacggtggggaagtcggggcgatgggtcaagaccgggatcagctggaccgcggtgacc
aacgtcgaccggatggcggccagcttgttcaccccgtcgcgcgcgggattcgagatggag
cgttacgacgccgatcagctgcgcggggtccgggcggtggcacgcgcattcgcgtcgaac
tatcaggcgatgagcggcaattcgatcgccctgagcgttgctccgcgcgacgtgtgggac
ctgctcgcacaggcccatgccaccggtgtcgtattggtggccggtcccacgctcggtgtg
gagcgggtggagctgatcgaatcctctggggtggggctcgcggtgtcgaaggccgccggg
ggcgtcgaggtgaagacgttcgtccacgtcaacgggcaaccgtattcgggtggggaggtc
gggctgatcggcgcgccgcatccgcacggcatgttctcgttctcgggtgcgggcgccggg
agcgacagcgagcgggcccaatcgggtgcgggcgccgggagcgtcatgctgatcgggcgg
ttcgagtcgccgggcaacgaccagggattgacgcggttgttgtcggcgccggcgatgttc
atccccgacgacgaggtcgccgacttcgccaccgaggtggtgcccagcctcccggcgtcg
ctgcccgtcttggtcgacgacgacgcgctggtcaagccgacgatcgacggaccgttcgcg
ctgctggtcgtcgacctgaacgagcagggtgcccgcgtcgtgtggcgcaccgcctacgac
gtcaacggcaagtgcaagaccgtcgacgagaagactcccgcgctggcgtatcgcgacgcc
gacgcggaatggcgggcattggccggggcgcaggacgcgatgcggacggtggccgcggtc
tgtgcccggtggcgcaaccaggccatccactacctgcagcaggagatgcgccgcggcgcc
gtcggcacgcatgccgaagtggtgcggtacatcgacgaattagcttcggcgccaacggtt
cccgacgccgcacgcttgggcgacgtcgacctgctgcgccgcgtctactcctactcgccg
atcgatgccgccgtcctgtgccacgaggtggtcccggtgctgcgcgagcacggggtccgc
gtcgaggtgcacggtgacgccgatcggttccgcgccgcccagggtgagcctgacatcacc
ctgagcgccgacgacggtggcgccaacgactggttcaacctgcatgtgcgggtggaggtc
gacggcgtcgtcgtgccgctggatcgactcatcgtcgaactcaacaccagctccacccac
atgctgctcgacgacggcacctacttctcgctcgaccacccggcgctggcgcggttggcc
gaattgctcggcgaggcgcgggcgctcggcgagatcgagggctcggcggtgcggcgcgat
tcctacaacgcgacgctgtgggaggagttgctctccctcggcgtcgtcgacggggatctg
gcgctgtggcacgaacggatgcgcagactggccgccgccgacctgcccgagccgggcgag
ccgcccgcgacgctgcgggccgacctgcgcgactatcagttggacggctacaactggttg
aagttcctgtgggacaaccagatcggcggaatcctcgccgacgacatggggttgggcaag
acggtgcaggcgctctccctgatcgccagcgcgctcgacgaacagccgcagagccggttc
ctggtgatcgcgccgaccagcgtcgtcgggaactgggtgcgcgaggcggagaagttccta
ccgtcggcccctgccgtcgccgtcggttcgccgcgtgccgacgggccgatcgtcgagcag
gtcggcgacgcgcggatcgtcgtgacgtcgtacacgctgttccgactccaattcgaggta
ttcgacggctatccgtgggcggcggtcttcttcgacgaggcgcagttcgtcaagaaccac
aacggcaagacgcaccagtgcgcgcggcggatcaacgcggggatgaaggtcgcgatgacc
ggcaccccgatggagaacagcctgatggaactgtgggcgctgctctcggtgggtgcgccg
ggattgttcccgtccccgcgcgcgttcaccgacttcttccgcaaaccgatcgaatcgggt
caggcgggcgaccgcctggcgctgctgcgccgacgcatcaagccggtcatgttgcggcgc
accaaggatcaggtggtcaaggatctgccgccgaagcaggagcaggtgctcgcgctcgac
ctgcatccgcgccacgagaggatctaccaaacgcgcttgaaccgggagcggcagaaggtc
ctcgggctgctgggagattgggagaagaaccggttcgagatcttccggtcgctgacgatg
ctgcggcagctggcgctgcacgccggactcgtcgacgagaaggatgccggcgtcgcgtcg
gcgaagatcgaccacctggccgaacaactgcccgaactgatcgccgaggggcattccgcc
ctggtgttcagccagttcaccggcttcctcgcgctggtccgggaacggctcgacgccgac
gggatcgcctacgcctatctggacgggacgatgacggcgaaggcgcgcgcggcggaggtg
gcgcggttcaccgacggcgaggtgaaggtcttcctgatcagcctcaaggcgggtggcttc
ggtttgaatctcaccgaggccgactactgcttcgtctgcgatccgtggtggaaccccgcc
gcggaggcgcaggccgtcgaccgcgcgcaccgcatcggccagaccaggccggtcacggtt
taccgacttgtctcggcggggaccatcgaggagaacgtcatcgcgttgcaagaccgcaag
cgcgagctgttcaacgcggtggtcgacgacggcgacctcttcggcaccggcatcaccgag
ggggacatccgggcgctgctcggggaggagttcccgcaatcgtccgggaatctggccatc
gagggcgcattgccctcgaacccctga
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