Gordonia sp. PS3: ACE11G_02855
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Entry
ACE11G_02855 CDS
T10835
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gop Gordonia sp. PS3
Pathway
gop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE11G_02855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gop03019
]
ACE11G_02855
03400 DNA repair and recombination proteins [BR:
gop03400
]
ACE11G_02855
Enzymes [BR:
gop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE11G_02855
Messenger RNA biogenesis [BR:
gop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE11G_02855
DNA repair and recombination proteins [BR:
gop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACE11G_02855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
MarR_2
RecQ_Zn_bind
TrmB
Motif
Other DBs
NCBI-ProteinID:
XGY34975
LinkDB
All DBs
Position
complement(618327..620423)
Genome browser
AA seq
698 aa
AA seq
DB search
MVTSPPQQLTPPQREIADQVITSLAGPDARLRADQETAVAALAAPGARVLVVQATGWGKS
AVYWAATAVIRAAGGGPTLIVSPLLSLMRDQVAAATRGGLRAATVNSANIDEWSAIEGAL
LDGSLDVLLVSPERLANPGFGRRVLEALAGRLGLVVIDEAHAISDWGHDFRPDYRRVSDV
LQRLNPQTSVLATTATANARVTDDVAAQLGDATLVLRGPLARKSLHLNVIDGLDPLQRYA
WVAQELPMLPGSGIVYVLTVADADRLVRAIRAVHGDELAVAAYTGGLPAEERHRLEDDLL
AGRVKALIATSALGMGFDKPDLGFVVHVGAPPSPVSYYQQVGRAGRALDEAVVMLLASRL
DDAIWEHFATATIPDPARMERLLQTLGDADGPMTVPGLESATGIRRGRVELMCKQLAVDG
VVERSSEGWSVTGKPWVYDAEHYEGVLAVRRREADIMRSFIRGEKCLMRLLTESLDDPRS
QDCGRCSVCRGEITPGLAEAPETRIVAEVGAVLRRDAELLEPRKMWPGGAFGSRGRIPPG
AMAEPGRVLAFADAPQWRDVLDAAKAGDSEASSALAEAAVTVVAQWGRSSGVRPDVIYSL
DLTGGTLAATLAQRLREVGRRTGDALPVRPGPRPGREATGADEAAYWRDHLGPMPAVSGA
VLLVIDETGSGWPVTLAAAALRESGASAVLPLVVHKTA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccccaccgcagcagctcactcccccgcagcgggagatcgccgatcaggtc
atcacctcgctcgccggccccgacgcccggctgcgggcggaccaggagactgcggtggca
gccctggccgcgcccggcgcccgcgtgctcgtggtgcaggccaccggctggggcaagtcc
gccgtgtactgggcggccacggccgtcatccgtgcggccggcggcggaccgaccctcatc
gtctcgccactgctgtcgctgatgcgcgaccaggtggcggcggccacgcgcggcggactg
cgtgctgccacagtgaattcggcgaatatcgacgaatggtcggccatcgagggcgcgttg
ctcgacggttcgctcgacgtactgctcgtgtcgcccgaacgactcgccaatccgggtttc
ggtcgccgcgtgctcgaagctctcgccgggcggctcggcctggtcgtgatcgacgaggcc
cacgccatctccgactggggacacgacttccgtcccgactaccggcgcgtgtcggacgtg
cttcagcggctgaatccgcagacctccgtgctggcgaccactgccaccgccaacgcccgc
gtcaccgacgacgtcgcggcgcagctcggcgacgccacgcttgtcctgcgcggcccgttg
gcacggaagtcattgcatctcaacgtgatcgatggactcgacccactgcagcggtacgcc
tgggtggcacaggaactaccgatgcttcccggttccggaatcgtctacgtgctcaccgtc
gcggacgccgatcgccttgtccgggcgatccgcgccgtccacggggacgaactcgcggtc
gcggcctacaccggcggactgcccgccgaggaaaggcatcgcctcgaagacgatctgctc
gcgggccgcgtcaaagctctcatcgcgacgtcggcgctcgggatgggtttcgacaaaccg
gatctggggttcgtcgtgcatgtgggagcaccgccgtctccggtctcgtactaccagcag
gtgggccgtgccggccgtgcgctcgacgaggcggtggtgatgctcctcgcctcccggctc
gacgacgcgatctgggagcatttcgccaccgcgacgatccccgacccggcgcgcatggaa
cgactgctgcagacgctgggcgacgccgacggcccgatgacggtcccgggcctggagtcc
gcgaccggtatccgccgcggccgcgtggaactgatgtgcaaacagttggcggtcgacgga
gtggtcgagcgatcgagcgaggggtggtcggtcaccgggaagccctgggtgtacgacgcc
gagcactacgagggcgtcctcgccgtccggcgtcgcgaggccgacatcatgcgctcgttc
atccgcggcgagaagtgcctcatgcgtctgctaaccgagtccctcgacgatcctcgctcc
caggactgcgggcgctgctcggtgtgccggggcgagatcacccccgggctcgccgaggca
ccggagacccggatcgtcgccgaggtcggagccgtgctgcggcgcgacgccgaactcctc
gaaccccgcaagatgtggccgggcggcgccttcggcagccgcggccggatcccgcccggc
gccatggccgaaccgggacgggtgctggccttcgccgacgcaccccagtggcgcgatgtc
ctcgacgccgcgaaggcgggcgactcggaggcgtcgagcgctctcgccgaagccgccgtg
accgtggtcgcgcagtggggacggtcgtcgggagtgcggccggacgtgatctactcgctc
gacctcacgggcggcacgctggccgctaccctcgctcaacgactgcgcgaggtgggccgc
cgcaccggcgacgcgctcccggtgcggcccggcccgcggcccggtcgagaggccaccggc
gcggacgaggcggcgtactggcgcgaccacctcgggcccatgcccgctgtgtcgggcgcg
gtgctcctggtgatcgacgagaccgggtccggctggccggtcaccctcgccgccgcggca
ctgcgcgagtccggggcctccgccgtcctgccgctggtggtccacaagaccgcgtga
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