Gordonia sp. PS3: ACE11G_04040
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Entry
ACE11G_04040 CDS
T10835
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gop Gordonia sp. PS3
Pathway
gop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE11G_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gop03021
]
ACE11G_04040
03400 DNA repair and recombination proteins [BR:
gop03400
]
ACE11G_04040
Enzymes [BR:
gop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE11G_04040
Transcription machinery [BR:
gop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE11G_04040
DNA repair and recombination proteins [BR:
gop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE11G_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XGY35203
LinkDB
All DBs
Position
893079..894131
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEEVIAENRSKFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTNIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKATGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSMTARDALASAGKTLVELFGLARELNVEAEGIEIGPSPQE
ADHIAAFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPSQVAGYDPATGTWSDDASFGDDGGEDYAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccactctgtccgaagaggtcatcgccgagaaccgctcgaag
ttcaccatcgaacccctcgagccgggcttcggctacaccttgggcaactcgctgcggcgc
acgctgctgtcgtccatcccgggcgcggcggtcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgttcccggcgtgaaggaggatgtcaccaacatcatcctgaacctc
aagggactggtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgtaagcag
ggcccgggcaccgtcaccggtgcggacatcgttccgcctgccggcgtcaccgtgcacaac
ccggacctgcacatcgcgaccctcaacgacaagggcaagctcgagatcgagctggtcgtc
gagcggggccgcggttacgtgccggccgtgcagaacaaggccaccggcgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtcctgaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctggtgctcgacgtggagaccaagaac
tccatgaccgcgcgtgacgccctggcgtcggccggcaagaccctggtcgagctcttcggc
ctggctcgggagctcaacgtcgaggccgagggcatcgagatcggcccgtcgccgcaggag
gcggatcacatcgccgcgttcagcctgccgatcgaggatctcgagctgaccgtccgttcg
tacaactgcctcaagcgcgagggtgtccacaccgtcggcgagctggttgcgcgcaccgag
tcggatctgctcgacatccgcaacttcggccagaagtcgatcgacgaggtcaaggtgaag
ctgcacagcctgggtctggccctcaaggacagcccggcgagcttcgacccgtcgcaggtc
gccggctacgacccggccaccggcacctggtccgatgatgcgtcgttcggcgacgacggt
ggcgaggattacgccgagaccgagcagctgtag
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