Gordonia sp. PS3: ACE11G_09850
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Entry
ACE11G_09850 CDS
T10835
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
gop Gordonia sp. PS3
Pathway
gop02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACE11G_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gop03021
]
ACE11G_09850
Transcription machinery [BR:
gop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACE11G_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
XGY33036
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All DBs
Position
2130020..2131417
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AA seq
465 aa
AA seq
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MATTKSTDAAAEATGAEDAPVAKKAPAKKAPAKKAAAKKAPAKKAAAKKTAAKKTAKKTA
AKKTTKKTAGSKAADPTVEVDETELDGGEGLDDVDDSQIDLADAELIVDDDDEADDAKPA
KAAKGRGRAKKDDEPKPDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNA
EEEVELAKRIEAGLFATERLRRVMESGEKLSVAQRRDLSWISRDGNRAKNHLLEANLRLV
VSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA
RTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISL
DQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLDTLSEREAGVVRLRFGLTD
GQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccaccaagtccaccgacgcagcagccgaagccaccggagcagaagacgccccg
gtagccaagaaggcgcccgccaagaaggcaccggccaagaaggccgccgcgaagaaggcg
cccgccaagaaggccgccgcgaagaagactgcagccaagaagactgcgaagaagaccgcc
gccaagaagacgacgaagaagaccgcgggcagcaaggccgccgatcccaccgtcgaggtg
gacgagaccgaactcgacggcggcgagggcctcgacgacgtcgacgactcgcagatcgat
ctcgccgacgccgaactgatcgtcgacgatgacgacgaggccgacgacgcgaagccggcc
aaggccgcgaagggccgcggccgcgcgaagaaggacgacgagcccaagccggacttcgtc
tgggacgaggacgagtccgaggcgctgcggcaggctcgcaaggacgccgaactcaccgcc
tcggccgactcggttcgcgcctacctcaagcagatcggcaaagtcgccctgctgaacgcg
gaggaagaggtcgagctcgccaagcgcatcgaggcgggactgttcgccaccgagcggctg
cgccgggtgatggagtcgggcgagaagctgtcggtggcgcagcggcgcgacctgtcgtgg
atctcgcgtgacggaaaccgtgccaagaaccacctcctcgaggccaacctgcggctcgtg
gtctccctcgccaagcggtacaccggtcgcgggatggccttcctcgatctgatccaggag
ggcaacctcggcctgatccgcgccgtcgagaagttcgactacaccaagggctacaagttc
tccacgtacgccacctggtggatccggcaggccatcacccgcgccatggccgaccaggcc
cgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctgggccgcatccag
cgcgaactccttcaggatctcggccgtgagccgacgccggaggaactcgccaaggaaatg
gacatcacgccggagaaggtgctggagatccagcagtacgcgcgtgaaccgatctcgctg
gaccagaccatcggcgacgagggcgacagccaactcggtgacttcatcgaggactccgaa
gcggtggtcgcggtcgacgcggtcagcttcacccttctgcaggaccagttgcaggacgtg
ctcgacaccttgtccgagcgtgaagcgggcgtcgtccggctgcgcttcggtctcaccgac
ggtcagccccgcaccctcgacgagatcggccaggtgtacggagtcacccgcgagcgcatc
cgccagatcgagtcgaagacgatgagcaagctccggcatccgagccgctcccaggtgctc
cgcgactacctggactga
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