KEGG   Gordonia sp. PS3: ACE11G_09850
Entry
ACE11G_09850      CDS       T10835                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
gop  Gordonia sp. PS3
Pathway
gop02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gop00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ACE11G_09850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gop03021]
    ACE11G_09850
Transcription machinery [BR:gop03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACE11G_09850
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 HTH_20
Other DBs
NCBI-ProteinID: XGY33036
LinkDB
Position
2130020..2131417
AA seq 465 aa
MATTKSTDAAAEATGAEDAPVAKKAPAKKAPAKKAAAKKAPAKKAAAKKTAAKKTAKKTA
AKKTTKKTAGSKAADPTVEVDETELDGGEGLDDVDDSQIDLADAELIVDDDDEADDAKPA
KAAKGRGRAKKDDEPKPDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNA
EEEVELAKRIEAGLFATERLRRVMESGEKLSVAQRRDLSWISRDGNRAKNHLLEANLRLV
VSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA
RTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISL
DQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLDTLSEREAGVVRLRFGLTD
GQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1398 nt   +upstreamnt  +downstreamnt
gtggcaaccaccaagtccaccgacgcagcagccgaagccaccggagcagaagacgccccg
gtagccaagaaggcgcccgccaagaaggcaccggccaagaaggccgccgcgaagaaggcg
cccgccaagaaggccgccgcgaagaagactgcagccaagaagactgcgaagaagaccgcc
gccaagaagacgacgaagaagaccgcgggcagcaaggccgccgatcccaccgtcgaggtg
gacgagaccgaactcgacggcggcgagggcctcgacgacgtcgacgactcgcagatcgat
ctcgccgacgccgaactgatcgtcgacgatgacgacgaggccgacgacgcgaagccggcc
aaggccgcgaagggccgcggccgcgcgaagaaggacgacgagcccaagccggacttcgtc
tgggacgaggacgagtccgaggcgctgcggcaggctcgcaaggacgccgaactcaccgcc
tcggccgactcggttcgcgcctacctcaagcagatcggcaaagtcgccctgctgaacgcg
gaggaagaggtcgagctcgccaagcgcatcgaggcgggactgttcgccaccgagcggctg
cgccgggtgatggagtcgggcgagaagctgtcggtggcgcagcggcgcgacctgtcgtgg
atctcgcgtgacggaaaccgtgccaagaaccacctcctcgaggccaacctgcggctcgtg
gtctccctcgccaagcggtacaccggtcgcgggatggccttcctcgatctgatccaggag
ggcaacctcggcctgatccgcgccgtcgagaagttcgactacaccaagggctacaagttc
tccacgtacgccacctggtggatccggcaggccatcacccgcgccatggccgaccaggcc
cgcaccatccgcatcccggtgcacatggtcgaggtcatcaacaagctgggccgcatccag
cgcgaactccttcaggatctcggccgtgagccgacgccggaggaactcgccaaggaaatg
gacatcacgccggagaaggtgctggagatccagcagtacgcgcgtgaaccgatctcgctg
gaccagaccatcggcgacgagggcgacagccaactcggtgacttcatcgaggactccgaa
gcggtggtcgcggtcgacgcggtcagcttcacccttctgcaggaccagttgcaggacgtg
ctcgacaccttgtccgagcgtgaagcgggcgtcgtccggctgcgcttcggtctcaccgac
ggtcagccccgcaccctcgacgagatcggccaggtgtacggagtcacccgcgagcgcatc
cgccagatcgagtcgaagacgatgagcaagctccggcatccgagccgctcccaggtgctc
cgcgactacctggactga

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