Gordonia sp. PS3: ACE11G_10320
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Entry
ACE11G_10320 CDS
T10835
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gop Gordonia sp. PS3
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gop03016
]
ACE11G_10320 (truB)
Enzymes [BR:
gop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACE11G_10320 (truB)
Transfer RNA biogenesis [BR:
gop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACE11G_10320 (truB)
Prokaryotic type
ACE11G_10320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XGY33125
LinkDB
All DBs
Position
complement(2229150..2230049)
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AA seq
299 aa
AA seq
DB search
MADASIENAGLLVVDKAAGITSHDVVAKCRKAFNTRRVGHAGTLDPMATGVLVIGIERAT
KLLGLLSLTTKSYAATIRLGQSTSTDDAEGEVIESRDASGVRDEEIAAVVASLTGDIEQV
PAKVSAIKVDGRRAHALVRTGAEFELQARPVTVDRFDVLDTRRDGEFIDLDVEVDCSSGT
YIRSLARDLGAALGVGGHLTALRRTAVGPFTLEHSRTMADVDENPGLSLGIDDAAKLCFP
HRAISDDEAESISQGRWLEPVGMKGIYTVVDPRGQAIALVQEKGKRASSVMVVRPATLR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcctccatcgagaacgccggactcctcgtcgtagataaggccgccggcatc
accagccacgacgtggtggccaagtgccgcaaggcgttcaacacccgtcgcgtcggacac
gcgggcaccctcgacccgatggcgaccggggttctcgtcatcggcatcgaacgcgcgacc
aagctgctcgggctgctctcgctcaccaccaagtcgtacgctgcgaccatccggctgggg
cagtcgacgtcgaccgacgacgccgagggcgaggtcatcgaatcgcgggacgcctcgggg
gtccgcgacgaggagatcgcggcggtcgtcgcgtcgctcaccggcgacatcgagcaggtg
cccgccaaggtcagcgcgatcaaggtcgacggtcgtcgcgcccacgcgctcgtccgcacc
ggggccgagttcgaactgcaggcgcggccggtcaccgtcgaccgtttcgacgtgctcgat
actcgccgggacggcgagttcatcgacctcgacgtcgaggtcgactgctcgtcgggcact
tatatccgttctctggcaagggatctcggtgccgcgctcggcgtcggcgggcacctgacg
gcgctgcgacgcaccgccgtcgggccgttcaccctggagcactcgcgaacgatggccgat
gtcgacgagaatcccggtttgagtctcggcatcgacgacgcggccaagttgtgcttcccg
catcgcgcgatctccgacgacgaggccgagtcgatcagccagggccgctggctggagccg
gtgggcatgaagggtatctacacggtggtcgatccgcgcgggcaggccatcgctctcgtg
caggagaagggcaagcgggcgagttcggtgatggtcgtgcgaccggcgacgctgcgctga
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