Gordonia sp. PS3: ACE11G_11110
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Entry
ACE11G_11110 CDS
T10835
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gop Gordonia sp. PS3
Pathway
gop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACE11G_11110 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gop03019
]
ACE11G_11110 (orn)
03009 Ribosome biogenesis [BR:
gop03009
]
ACE11G_11110 (orn)
Messenger RNA biogenesis [BR:
gop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACE11G_11110 (orn)
Ribosome biogenesis [BR:
gop03009
]
Eukaryotic type
Pre-60S particles
RNases
ACE11G_11110 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XGY33268
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All DBs
Position
2396139..2396738
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AA seq
199 aa
AA seq
DB search
MQDKLVWIDCEMTGLDIGSDKLIEIAALVTDSDLNIIGEGVDLVIHADDEALAGMPEVVA
KMHADSGLTEEVRASTVTLAEAEKAVLDYLREHITTAGAAPLAGNSIGTDRGFIARDMPE
LNAYLHYRMVDVSSIKELCRRWYPPIYFGQPQKGLAHRALADIRESIRELRYYRETAFVP
APGPDAKTLEEVVERLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagacaaactcgtgtggatcgactgtgagatgaccggactggatatcggctcggac
aagctcatcgaaatcgccgctctcgtcaccgacagcgacttgaacatcatcggcgagggg
gtcgacctcgtcatccacgccgacgacgaggccctcgcgggcatgcccgaggtggtcgcc
aagatgcatgccgactccgggctcaccgaagaggtgcgcgcctccaccgtcacgctcgcc
gaagcggagaaggcggttctggactacctgcgcgagcacatcaccacggccggcgcggcc
ccgctcgcgggcaactccatcggcaccgatcgcggcttcatcgcccgggacatgcccgag
ctgaacgcctacctgcactatcggatggtggacgtcagctcgatcaaggagctgtgccgt
cgctggtacccgccgatctacttcggtcagccgcagaaggggctcgcccatcgcgcactc
gccgacatccgcgaatcgatccgggaactgcgctactaccgcgagaccgccttcgttccc
gcccccggccccgacgcgaagaccctcgaagaggtcgtcgaacggcttggccccgcgtaa
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