Gordonia sp. PS3: ACE11G_11410
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Entry
ACE11G_11410 CDS
T10835
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gop Gordonia sp. PS3
Pathway
gop03018
RNA degradation
Brite
Enzymes [BR:
gop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACE11G_11410
Messenger RNA biogenesis [BR:
gop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE11G_11410
Ribosome biogenesis [BR:
gop03009
]
Prokaryotic type
rRNA helicases
ACE11G_11410
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XGY33325
LinkDB
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Position
complement(2462848..2464623)
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AA seq
591 aa
AA seq
DB search
MSESENTSSTAPAAEKSTAFGDLGIDPGVLKALDDVGYETPSPIQAATIPPLMEGRDVVG
LAQTGTGKTAAFALPILTRLDTSARKPQALVLAPTRELALQVAEAFGSYSTYLPEVKVLP
IYGGQSYGIQLSGLRRGAQVIVGTPGRVIDHLDKGTLDLSQLEFLVLDEADEMLTMGFAE
DVERILADTPDQKQVALFSATMPAAIGRLARKYLNNPQEVTVKNKTATAQNITQKYLQVS
HQRKLDALTRVLEVEPFDGMIVFVRTKSATEELAEKLRARGLSAMAINGDMVQAQRERTI
NQLKDGSLDILVATDVAARGLDVDRISHVVNYDIPHDVESYVHRIGRTGRAGRSGTALLF
VSPRERHLLRSIERHTRQDLEEIDLPSVDDVNAQRVAKFADSITENLASDNLDLFRGLVE
NYARENDVAMADIAAALALETRDGGFLMAPDPPKGERGDRGDRRDRAPRGGGHFATYRIA
VGRKHKVSPGAIVGAIANEGGLTRGDFGNISIRDDFSLVELPNDLDAETLGMLKHTKIGK
HPIDLRPDMGPPRGRGGARGSARGYEDRGRKGGDKFGKRPARVAGRGRDSR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatccgagaacaccagctctaccgcgcccgcggccgagaagtccaccgccttc
ggtgacctcggcatcgaccccggcgtgctcaaggcgctcgacgacgtcggctacgagacg
ccgtcgccgatccaggcggcgaccatccctccgttgatggagggacgcgacgtcgtcgga
ctggcgcagaccggcaccggcaagaccgctgccttcgcactgccgatcctcacccgactc
gacacctcggcccgcaagccgcaggccctcgtgctcgcgcccacgcgcgaactggcgctg
caggtggccgaggccttcggcagctattcgacgtaccttcccgaggtcaaggtgctgccg
atctatggcggccagagctacgggatccagctgtccggcctgcgccgcggagcccaggtg
atcgtcggcacgccgggccgcgtgatcgatcatctcgacaagggcaccctcgacctgtcg
cagctcgagttcctcgtgctcgacgaggccgacgagatgctgacgatgggcttcgccgag
gacgtcgagcgaatcctcgccgacaccccggatcagaagcaggtcgcgctgttctccgcg
accatgccggccgctatcggccgcctggcgcgcaagtacctgaacaacccgcaggaagtc
accgtcaagaacaagacggcgaccgcgcagaacatcacgcagaagtacctgcaggtgtcg
caccagcgcaagctcgacgccctcacgcgggtgctcgaagtggagccgttcgacggcatg
atcgtcttcgtccggaccaagtcggccaccgaggaactcgccgagaagctgcgcgcccgc
ggcctgagcgcgatggcgatcaacggcgacatggtccaggcccagcgtgagcgcaccatc
aatcagctcaaggacggttcgctcgacatcctcgtggccaccgatgtggctgctcgagga
ctggacgtcgaccgcatctcgcatgtggtgaactacgacatcccgcacgacgtcgagtcg
tacgtgcaccgcatcgggcgtaccggccgggccgggcggtcgggcaccgcgctgctgttc
gtctcgcctcgcgaacgtcatctgctgcggtcgatcgagcgtcacacccggcaggatctc
gaagagatcgatctgccgagcgtcgacgacgtgaacgcccagcgtgtcgccaagttcgcc
gattcgatcaccgagaacctcgcctccgacaatctggatctgttccgcgggctggtggag
aactacgcccgcgagaacgacgtcgcgatggctgacatcgccgcggcgctggccctggag
acccgcgacggcggcttcctgatggctcccgatccgcccaagggtgagcggggcgatcgc
ggggaccggcgtgaccgtgcaccgcgcggcggcggtcatttcgccacgtaccgcatcgcc
gtcggccgcaagcacaaggtgtcgccgggcgcgatcgtcggcgcgatcgccaacgagggc
ggcctcactcgcggtgacttcggcaacatcagcatccgtgacgacttcagcctcgtggaa
ctccccaacgatctcgacgccgagacgctcgggatgctcaagcacaccaagatcggcaag
catccgatcgacctgcgcccggacatgggtccgccgcgcggtcggggaggcgctcgcgga
tcggcgcgcggatacgaagaccgcggccgcaagggcggcgacaagttcggcaagcgaccg
gcccgcgtggccggccgcggtcgcgacagtcgctag
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