Gordonia sp. PS3: ACE11G_11715
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Entry
ACE11G_11715 CDS
T10835
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gop Gordonia sp. PS3
Pathway
gop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE11G_11715 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gop03021
]
ACE11G_11715 (rho)
03019 Messenger RNA biogenesis [BR:
gop03019
]
ACE11G_11715 (rho)
Transcription machinery [BR:
gop03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACE11G_11715 (rho)
Messenger RNA biogenesis [BR:
gop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACE11G_11715 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
XGY36193
LinkDB
All DBs
Position
complement(2527103..2529031)
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AA seq
642 aa
AA seq
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MLLPELRSLAAELGIKGTSGMRKGDLIDVIRAHQHGGAGSAKGAEKAAADKRAEKSAEKS
DAAKSDAAKSAPEKPQAGERAANDQQPGGRRNARRGADAAGDGGSSQTAKAPQTDSADQK
SADQKSSDQKGSDQRNTEQGRDEKPAQQRGEQDGDGNRRNRNRNRGGERNQGDKSQDGGD
KSGQGNQNQGGNQNQGQKNQGGNQGQGGNQGGGQNQNRNNNDDDDGEGGGRRRGRRFRER
RRGRDRDGGNAGEPQVNEGDVLAPVAGILDVLDNYAFVRTSGYLAGPNDVYVSMNMVRRN
GLRRGDAITGAVKVPREGENPNNQRQKFNPLVRLDTVNGTDVDSARKRPDFTKLTPLYPN
QRLRLETTPERISTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAITTNNPECHLM
VVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVENGMDVVVLLD
SITRLGRAYNNASPASGRILSGGVDSQALYPPKRFLGAARNIENGGSLTIIASALVETGS
TGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNLSSTRKDELLLSPDEFAIVHKLRR
LLSGLDSQAAIDLLVAQLKKTRSNVEFLMQVSKNAPSVVDND
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgcccgaactccgcagtctggctgctgagctgggcatcaagggcacgtcggga
atgcgcaagggcgatctgatcgacgtgatcagggctcatcagcacggcggagcaggctcc
gccaagggcgcagagaaggccgcagcggacaagcgtgcagagaagtccgcagagaagtcc
gacgcagcgaagtctgacgcagcgaagtctgcgccggagaagccgcaggccggcgagcgt
gccgcgaacgatcagcagcccggtggacggcgcaacgcccggcgcggcgccgatgctgcg
ggcgacggtggatcgtcgcagaccgcgaaggctccgcagaccgacagcgctgaccagaag
agcgctgaccagaagagctccgaccagaagggctccgaccagcgcaacaccgagcagggc
cgcgacgagaagcccgcccagcagcgcggcgagcaggacggcgacggcaaccggcgcaac
cgcaaccggaaccgcgggggagagcggaaccagggcgacaagagccaggacggcggcgat
aagtcgggtcagggcaatcagaaccagggcgggaaccagaaccagggtcagaagaaccag
ggcggcaaccagggccagggcggcaaccagggcggcggtcagaaccagaaccgcaacaac
aacgatgacgacgacggcgagggcggtggtcgtcgccgcggacgccggttccgcgagcgt
cgtcgcggacgcgaccgcgacggcggcaacgcgggggagccccaggtcaacgagggcgac
gtcctcgcgccggtggcgggcatcctcgacgtgctcgacaactacgcgttcgtgcggacg
tccggctacctggccggacccaacgacgtctacgtatcgatgaacatggtccgccgcaac
ggactgcgccgcggtgacgcgatcaccggtgccgtgaaggtgccgcgcgagggcgagaac
cccaacaaccagcggcagaagttcaatccgctggtgcggctggacaccgtcaacggcacc
gacgtcgactcggcgcgcaagcgtcccgacttcaccaagctgactccgctctacccgaat
cagcgactgcggctcgagaccacgcccgaacggatctccacccgcgtcatcgacctgatc
atgccgatcggcaaggggcagcgtgcgctgatcgtctccccgccgaaggccggtaagacg
acgatcctgcaggacatcgcgaacgcgatcaccaccaacaatccggaatgccacctgatg
gtggtgctggtggacgagcgtcccgaagaagtcaccgatatgcagcggagtgtgaagggc
gaggtcatcgcgtcgaccttcgaccgcccgccgtcggatcacaccagcgtcgcggagctc
gcgatcgagcgtgccaagcggctggtggagaacggtatggacgtcgtcgtgctgctcgac
tcgatcacccgtctcggccgcgcgtacaacaacgcatcgcccgcctcgggccgcatcctc
tccggtggtgtcgactcccaggcgctgtatccgccgaagcgattcctcggtgccgcgcgc
aacatcgagaacggcggatcgctgacgatcatcgcttcggcgctggtcgagaccgggtcg
acgggcgacacggtgatcttcgaggagttcaagggcacgggcaacgccgaactgaagctc
gaccgtaagatcgccgagcggcgcgtcttccccgcggtcgacgtcaacctgtcgagcacg
cgcaaggacgagctcctgctgtcgccggatgagttcgccatcgtccacaaactgcgccgt
ctgctctccggactggactcgcaggccgcgatcgacctgctcgtcgcgcagctcaagaag
acgcggagcaatgtcgagttcctgatgcaggtgagcaagaacgcgcccagcgtcgtcgac
aacgactga
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