Gordonia sp. PS3: ACE11G_13215
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Entry
ACE11G_13215 CDS
T10835
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gop Gordonia sp. PS3
Pathway
gop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACE11G_13215 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gop03019
]
ACE11G_13215 (recQ)
03400 DNA repair and recombination proteins [BR:
gop03400
]
ACE11G_13215 (recQ)
Enzymes [BR:
gop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACE11G_13215 (recQ)
Messenger RNA biogenesis [BR:
gop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACE11G_13215 (recQ)
DNA repair and recombination proteins [BR:
gop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACE11G_13215 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
DUF763
HHH
HHH_5
ResIII
Motif
Other DBs
NCBI-ProteinID:
XGY33657
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All DBs
Position
2854773..2856599
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AA seq
608 aa
AA seq
DB search
MPDQYQVLRDVFGYSEFRGDQEQIVSHVIGGGDAVVLMPTGGGKSLCYQVPALVREGCAV
VVSPLIALMADQVGALRQLGVRAAYLNSTQLPEERAEVERAFLAGELDLIYVAPERLSQR
GTREFLARGTLSLIAIDEAHCVSQWGHDFRPDYLALGELADIWPDVPRIALTATATRRTH
EELTARLHLEGARHFVSSFDRPNITYRIEPKAQANRQLLEFIRTEGVVDGEPATGIVYAL
SRNSVENIAEFLRANGVDAVPYHAGLDRRVREDTLHRFLREDGIVVVATIAFGMGIDKPD
VRFVAHIDLPKSIEGYYQETGRAGRDGLPSVAWMAYGLADVMNQRRLIDQSDGDAARRRV
QSQLLDAMLALCETATCRRQQLLGYFDQRIEPCGNCDTCLNPPKTWDGTVPAQKLLSTIF
RLDRDFNRSAYGAGHLIDILLGVDNARIQQQGHDRLTTYGIGTELDAGGWRSVVRQLVAL
GIIAPQGDYGVLRLTEKAAPVLRGETTVMLREDTKAPARSRKAARSSAPDLPDADRGLFE
ALRRWRSSVAKDAGLPAYTVLGNKTLEELARAKPSNHEELLAISGIGQSKLEKYGDQVLE
VLVDFESA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaccagtatcaagtcctccgggacgtcttcggctactcggagttccgcggcgac
caggagcagatcgtctcgcacgtgatcggcggaggcgacgccgtcgtgctcatgccgacc
ggcggcggcaagagcctctgctatcaggtgcccgcgctcgtccgtgaggggtgcgccgtc
gtcgtctcgccgctgatcgcgctcatggccgaccaggtgggagctctgcgccaactgggc
gtccgcgccgcctacctgaactccactcagctccccgaagagcgagcggaagtcgaaaga
gcattcctcgcaggcgaactcgacctgatctacgtcgcccccgaacggctgagccaacgg
gggactcgcgagttcctggcgcgcggcacgctgtcgctgatcgcgatcgacgaggcgcac
tgcgtctcgcagtggggccacgacttccggccggactatctggcgctgggagagctggcg
gacatctggccggacgttccgcgaatcgcgctcaccgcgaccgccacccgccgcacgcac
gaagagctcaccgcgcggctgcacctggagggcgcacgccacttcgtctccagcttcgac
cggcccaacatcacctaccgcatcgagcccaaggcgcaagccaacaggcaactgctggag
ttcatccgaacggaaggcgtcgtcgacggcgagcccgcgaccggcatcgtctacgcgctg
agccgcaacagcgtggagaacatcgccgagttcctccgcgcgaacggcgtcgacgcggtg
ccgtaccacgcgggactcgaccgccgggtgcgcgaggacacgctgcaccggttcctgcgc
gaggacgggatcgtggtggtcgcgaccatcgcgttcggcatgggcatcgacaaacccgat
gtgcgcttcgtggcgcacatcgatcttccgaagagcatcgagggttactaccaggagacc
ggacgcgccggccgcgacggcctgccgtcggtggcgtggatggcctacgggctcgccgac
gtcatgaaccagcggcgcctgatcgaccagtccgacggcgacgccgcacggcgccgggtg
cagtcgcagctgctcgacgcgatgctcgcactctgcgagacggcgacgtgccggaggcag
cagttgctggggtacttcgaccagcggatcgaaccctgcggcaactgcgacacctgtctg
aacccgccgaagacctgggacggcacggtgccggcgcagaagctcctgtcgaccatcttc
cggctcgaccgcgacttcaaccggtcggcctatggcgccggtcatctcatcgacatcctg
ctgggtgtggacaacgctcgtatccagcagcagggccacgatcgcctcaccacctacggc
atcggcaccgaactcgacgccggcggatggcgaagcgtggtccgccagctggtggctctc
ggaatcatcgctccgcagggcgattacggagtgctgcgcctcaccgagaaggccgccccc
gttctgcgcggcgagaccacggtgatgctccgcgaggacacgaaggctccggcccgctcc
cggaaagccgcacgctcgagcgcaccggacctgccggacgccgatcgcggactcttcgag
gcactgcgccgctggcgctcgtccgtcgcgaaggacgcggggctgcccgcctacacggtg
ctcggaaacaagaccctcgaagagctcgcacgtgcgaaaccgtccaatcacgaagagctg
ctggcgatctccggtatcgggcagagcaagctcgagaagtacggcgaccaggtcctggag
gtcctggtcgatttcgagtccgcgtag
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