Gordonia sp. PS3: ACE11G_17605
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Entry
ACE11G_17605 CDS
T10835
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gop Gordonia sp. PS3
Brite
KEGG Orthology (KO) [BR:
gop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gop03032
]
ACE11G_17605 (gyrB)
03400 DNA repair and recombination proteins [BR:
gop03400
]
ACE11G_17605 (gyrB)
Enzymes [BR:
gop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACE11G_17605 (gyrB)
DNA replication proteins [BR:
gop03032
]
Prokaryotic type
DNA Topoisomerases
ACE11G_17605 (gyrB)
DNA repair and recombination proteins [BR:
gop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACE11G_17605 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
DUF2963
Trep_dent_lipo
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
XGY34448
LinkDB
All DBs
Position
complement(3799340..3801394)
Genome browser
AA seq
684 aa
AA seq
DB search
MADTSGNAPKKSGKSKPSEYGADSISILEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDN
SVDEAMAGYATRVDVTLLADGGIRVVDDGRGMPVGMHATGVPAVEVIMTQLHAGGKFDSD
SYAVSGGLHGVGISVVNALSTKVELEIKRNGSVWRQTYTNAEPGPLVEGEAASGTGTSVS
FWADGKIFETTEYNIETIARRLQEMAFLNKGLTITLTDERVHEAVLEAEVEESEDGDASI
KTEEQKATAIAKVKTRTYHYPDGLIDYIKHLNSRTKAPIHKTVVGFTAKGEGHEVEIAMQ
WNEGYAESVHTFANTINTAEGGTHEEGFRAALTSTVNRYAIDKKLIKEKDGKLSGDDIRE
GLAAVISVKVADPQFEGQTKTKLGNTEVKSFVQKTCNEHLAMWFDANPAEAKTIIRKAAD
SQQARLAARRARELVRRKTATDIGGLPGKLADCRSNDPSKCEVYIVEGDSAGGSAKSGRD
SMYQAILPLRGKIINVEKARIDRVLKNAEVQSIITAFGTGIHDEFDISKLRYHKIVLMAD
ADVDGQHIATLLLTLLFRFMRPLIEQGHVFLAMPPLYKLKWQKGAEPEFAYNDRERDALL
EAGRAAGKKINPDDGIQRYKGLGEMNASELWETTMDPEVRVLKQVTLDDAAAADELFSIL
MGEDVVARRTFIARNAKDVRFLDV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacaccagcggcaacgcacctaagaagtcaggcaagtccaagccgagcgaatac
ggtgccgactcgatcagcatcctcgagggtctggaagctgtccgcaagcgtcccggcatg
tacatcggttccaccggtgagcgcggtctgcaccacctgatctgggaagtcgtcgacaac
tcggtcgacgaggcgatggccggctacgccacccgcgtcgacgtgaccctgctggccgac
ggcggcatccgcgtcgtggacgacggtcgtggcatgcccgtcggcatgcatgctacgggt
gtgcccgcggtggaggtcatcatgacccagctgcacgccggcggtaagttcgactccgat
tcatacgcggtgtcgggcggtctgcacggcgtcggcatctcggtggtcaatgcgctgtcc
acgaaggtcgagctggagatcaagcgcaacggttcggtgtggcggcagacgtacaccaac
gccgagccgggtccgctcgtcgagggcgaggccgcgtccggcaccgggaccagcgtctcc
ttctgggccgacgggaagatcttcgagaccaccgagtacaacatcgagacgatcgcccgg
cggctccaggagatggccttcctgaacaagggcctcaccatcaccctgaccgacgagcgg
gtccacgaggccgtgctcgaggcagaggtggaggagtcggaggacggcgacgccagcatc
aagaccgaagagcagaaggctacggccatcgccaaggtcaagacgcggacgtaccactac
ccggacggcctcatcgactacatcaagcacctcaacagccgcaccaaggccccgatccac
aagaccgtcgtcggcttcaccgccaagggtgagggccacgaggtcgagatcgcgatgcag
tggaacgagggatacgcggagtcggtccacaccttcgccaacaccatcaacaccgctgag
ggcggtactcacgaagagggcttccgcgcggcgctgaccagcacggtcaatcgctatgcg
atcgacaagaagctcatcaaggagaaggacggcaagctctccggcgacgacatccgagag
ggtctggccgccgtcatctccgtcaaggtggccgacccgcagttcgagggccagaccaag
accaagctcggtaacaccgaggtcaagagcttcgtccagaagacgtgcaacgagcacctg
gcgatgtggttcgacgcgaacccggccgaggccaagaccatcatccgcaaggccgcggat
tcgcagcaggcccgactcgcagcgcgtcgcgcacgtgagctcgtccgccgcaagaccgcg
accgacatcggcggcctgcccggcaagctcgccgactgccgcagcaacgaccccagcaag
tgcgaggtctacatcgtggagggcgactccgcgggcggttccgccaagtcgggccgcgac
tcgatgtaccaggcgatcctgccgctgcgaggcaagatcatcaacgtcgagaaggcccgc
atcgaccgcgttctcaagaacgccgaagtccagtcgatcatcaccgccttcggcaccggc
atccacgatgagttcgacatcagcaagctgcgctatcacaagatcgtgctgatggccgac
gccgacgtcgacggtcagcacatcgcgacgctgctgctcacgctgctgttccgcttcatg
cggccgttgatcgaacagggacacgtcttcctcgcgatgcccccgctgtacaagctcaag
tggcagaagggcgccgagccggagttcgcgtacaacgaccgcgagcgcgacgcgctgctc
gaggccggccgcgccgcgggcaagaagatcaacccggacgacggcatccagcgttacaag
ggtctgggcgagatgaacgccagcgagctgtgggagaccacgatggatccggaggtccgt
gtcctcaagcaggtcaccctcgacgacgccgctgccgccgacgaactgttctcgatcctc
atgggcgaggacgtggtggcacgccgcaccttcatcgcgcgcaacgccaaggacgttcgc
ttcctcgacgtctga
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