Gordonia phthalatica: ACH46_06655 Help Entry ACH46_06655       CDS       T04097                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism goq  Gordonia phthalatica Brite KEGG Orthology (KO) [BR:goq00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:goq03400]     ACH46_06655 Enzymes [BR:goq01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      ACH46_06655     5.6.2.6  RNA 3'-5' helicase      ACH46_06655 DNA repair and recombination proteins [BR:goq03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     ACH46_06655 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD WHD_4th_Lhr Helicase_C ResIII AlkZ-like DUF6406 PhoH HTH_20 MarR_2 AAA_25 HTH_IclR AAA_22 HTH_Crp_2 Dimerisation Motif Other DBs NCBI-ProteinID:  ALG84245 UniProt:  A0A0N9N242 LinkDB All DBs Position complement(1416879..1421492) Genome browser AA seq 1537 aa AA seqDB search MHPATQRWFSEAFGTPTRAQSGAWSAIARGDHTLVVAPTGSGKTLAAFLWAIDSLHRERL TEPREEKAGVRILYVSPLKALAVDVQRNLASPLVGIANAAASLGVEAPSISVGIRSGDTP PADRRRLQTHPPDILITTPESLYLMLTSSVRETLATVTTVIVDEVHAVAATKRGTHLALS LERLDALLDAPAQRIGLSATVRPEALVGEFLAGAAECTVVKPPAAKTFDLTVDVPVEDMA NIPPPATGAEGLDDAFSPTAGSLWPHVEAAIVDRIEANRSTIVFANSRRLAERLTARLNE IAAQRAGDDVESDRPNPGVPGGMPSYVSGSGTTAGAESVLARAHHGSVSKEQRAEIEDAL KSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVAAGLQRIGRAGHQVGEVSQGVLFPK HRTDLIHCTVVTQMMLSERIEALSVPSNPLDILAQQTIAATAVDDLDVDEWFDTVRRAMP YKTLTRDVYDAVLDLISGRYPSDEFAELRPRVDYDRTAGTLVARRGTLRLAVTSGGTIPD RGLFGVFLVGSEEASRNGQPRRVGELDEEMVYESRVGDVFALGASSWRIEQITHDRVLVS PAFGMPGRLPFWIGDAVGRPAELGAAIGKFVGLAGDDEKLSRLADDLGLSTYARQNLAAL IAEQREATGTLPTDRTLVLERFRDELGDWRLVLHSPYGLRVHAPWASAIAAQLSARLGLD GATTATDDGIIVRLPDTDDDPPGADVFVLDPLHIEDDVTRALADSSLFASRFRECAGRAL LLPRRDPGKRAPLWQQRQRSAQLLSVASRFPDFPIILETVRECLADVYDLPALIDVLTRI ARRKIRVVEVETAAPSPFAASMLLGYVGSFIYDDDDAPLAERRATALSLDTALLAQLLGR VDLRELLDPTVIDDVVARLQRTAPERQARDGQDVIDLLRWLGPCSRDEVAARYRGEDDLT ALLDGLVADGRAIDVSMRGTPKLAAVDDAARLRDGLGVPLPLGVPAAYLEPIPDPITDLV HRFARTHGPFTAADVAEELGMAPAVVARTLDELAARHTVIEGEFTPLPEGDRVSQWCHSD VLTQLRRGSLAPGRAEVEPVSGDAYARFLLGWHRIGDTSRPRGVAGVAAVVEQLAGQPIP ASAWETLVLPARVDDYLPGMLDELTASGEVIWSGHGGIGGADGWVALHLADAAALTLRPP QGDELEATQRTVLDALGRLGAVRFRELSAALTDAGTPIGDGELPDLLWDLVWGGYITNDS FSVVRAALDPPRAARSSATSAHRTRGRAPRLRAARLSTHYLAGAGAPAATPPHVGGRWSV LRRVDVDPTTAAAATCEILLDRYGVVTKGSVAAESTEGGFARIYKALGVFEDNGQVRRGY YIDGLGGAQFAAGHTVDLLRETVVPTREQRSEAVVLATTDPANPYGAALDWPARSVESGH RPGRKPGAVVVLVAGHAVVFVERGGKTVLTFTDDTDALEAAADALFQAVSAGRIPRIHID QVDGEPVRRTPLGEQLVAAGFATTPRGLRMNYDPRRR NT seq 4614 nt NT seq  +upstreamnt  +downstreamnt atgcatccggccacgcaacggtggttcagcgaggcgttcggcacgccgacgcgggcccag tccggtgcgtggtcggccatcgcgcgcggcgaccacacgctcgtcgtcgcgccgaccggc tccggcaagacgctcgcagcgttcctgtgggccatcgactccctgcaccgcgagcggctc acggaaccacgggaggagaaggcgggcgtccgcatcctgtacgtctcgccgctcaaggcg ctggccgtggacgtgcagcgcaatctggcgtcgccgctcgtcggaatcgccaacgccgcc gcgagtctgggcgtggaggcgccgtcgatcagcgtcgggatccgctccggcgacaccccg cccgccgaccgtcgccggctgcagacgcacccgccggacatcctgatcaccacccccgag tccctctacctgatgctgacgtcgtcggtccgcgagaccctcgccaccgtgacgacggtg atcgtcgacgaggtccacgccgtcgccgccaccaagcgcggcacccatctggccctgtcg ctggagcgtctcgacgccctgttggacgcgcctgcgcaacgcatcggactgtcggccacc gtgcgaccggaggccctggtcggcgagttcctggccggtgcggccgagtgcacggtggtg aagccgcccgccgcgaagaccttcgacctgaccgtcgacgtgccggtggaggacatggcg aacatcccgccgcctgcgaccggcgccgagggactcgacgacgcgttctcccccaccgcc ggatcgctgtggccgcacgtcgaggcagcgatcgtcgatcggatcgaggcaaaccgctcg acgatcgtgttcgcgaactcccgacgcctggccgaacggctcaccgcccgactcaacgag atcgcggcccagcgcgccggcgacgacgtcgaatcggaccgcccgaaccccggagtgccg ggcggcatgccgtcgtacgtgtcgggcagcggaaccaccgccggcgcggagtccgtcctc gcccgcgcccatcacgggtcggtcagcaaggagcagcgcgccgagatcgaggacgcgctg aagtccggccggctgcggtgcgtagtcgcgaccagctcgttggagctgggcatcgacatg ggggccgtcgacctggtgatccaggtggaggcaccgccgtcggtggccgccggtctgcag cgcatcggccgcgccggtcaccaggtcggcgaagtgagccagggcgtcctgttccccaag caccgcaccgatctgatccactgcaccgtggtcacccagatgatgctgagcgagaggatc gaggcgctgtcggtgccgtcgaatcccctcgacatcctggcccagcagaccatcgccgcg accgccgtcgacgacctcgacgtggacgagtggttcgacaccgtccggcgtgcgatgccg tacaagaccctgacccgcgacgtctacgacgcggtcctcgatctgatctccgggcggtat ccctccgacgagttcgccgagctgcggccgcgcgtcgactacgaccggaccgccggaacg ctggtcgcccgccgaggaaccctgcgactggccgtcacctccggcgggacgatccccgac cgcgggctgttcggcgtcttcctcgtcgggtcggaggaggcctcgcggaacgggcagccg cgccgcgtcggagagctcgacgaggagatggtgtacgagtcgcgggtcggcgacgtcttc gcactcggggcttcgagctggcggatcgagcagatcacgcacgaccgcgtgctggtgtcc cccgcgttcgggatgcccggacggctgcccttctggatcggcgacgccgtcggccgtccg gcggagctgggtgcggcgatcggtaagttcgtcgggctggccggcgatgacgagaagctc tcccgcctggccgacgacctgggattgagcacgtacgcccgacagaacctcgcggcgctg atcgccgagcagcgggaggccaccggcacccttccgaccgaccgcacgctggtgctggaa cgcttccgcgacgagctcggcgactggcggctggtgctgcactcgccctacgggctgcgc gtgcacgcgccgtgggcgagtgcgatcgccgcgcagctgtcggctcggctgggtctcgac ggcgccaccaccgccaccgacgacggcatcatcgtccgactgccggacaccgacgacgac ccgcccggcgccgacgtcttcgtcctggacccgctgcacatcgaggacgacgtgacgcgc gcgctggccgactcgtcgctgttcgcgtctcggttccgcgagtgcgccggccgagctctg ctgctgcctcgacgtgacccgggcaagcgcgcaccactgtggcagcaacggcagcggagc gcgcagttgctgtctgtggcctcgcggttcccggacttcccgatcattctggagaccgtc cgcgagtgccttgccgacgtctacgacctgcccgcgttgatcgacgtgctgacgcggatc gcgcgccggaagatccgcgtcgtcgaggtggagaccgcggcgccgtcgccgttcgccgcg tcgatgctgctcgggtacgtcggatcgttcatctacgacgacgacgacgcgccgctcgcc gaacgccgcgccaccgcgctctccctcgacaccgcgctgctcgcgcagctgctggggcgg gtcgacctgcgcgagctgctggaccccacggtgatcgacgacgtggtcgcccgcctgcag cggaccgctccggaacgacaggcacgggacggccaggacgtgatcgacctgctgcgctgg ttgggcccgtgttcgcgcgacgaggtcgccgcgcggtatcgcggagaggacgatctcacc gcactgctcgacggcctggtcgccgacggtcgcgccatcgacgtcagtatgcggggaacg ccgaagctcgcggcggtcgacgacgccgcccgtctccgcgacggcctcggcgttcccctg ccgctcggggttccggccgcctacctggaaccgatcccggatccgatcaccgacctggtg catcgattcgcccgtacgcacggtccgttcaccgccgcggacgtcgccgaggaactgggc atggcaccggcggtcgtcgcgcgcactctcgacgagttggccgcacggcacacggtgatc gagggagagttcacacccctgcccgagggcgatcgcgtgtctcaatggtgtcactcggac gtgttgacgcagttgcggcgtggttcgctcgcgcccggccgtgccgaggtggagccggtg tccggagacgcctatgcgcggttcctgctcggttggcaccggatcggcgacacgtcgcgt ccgcggggcgtggcgggggtcgccgccgtcgtcgagcagctggccggccagccgattccc gcgtccgcgtgggagacgctcgtactcccggctcgcgtcgacgactacctgccgggaatg ctcgacgagctcactgcgtcgggcgaggtgatctggtccggtcacggcggcatcggcggc gcggacggctgggtggcgttgcatctggccgacgccgctgccctgaccctgcgaccaccg cagggcgacgaactggaggcgacgcagcggacggttctcgacgccctgggtcgtctgggc gcggtccgcttccgtgaactgtccgcggcgttgaccgacgcaggcacaccgatcggcgac ggcgagctccccgacctgctgtgggatctggtgtggggcggctacatcaccaacgactcg ttctcagtcgtgcgggcggcgctcgatccgccgcgggcagcgcggtcgtcggccacgtcc gcacatcggacgcgcggtcgggcaccgcggctgcgagcggcacgactgtcgacgcactat ctcgcgggtgccggcgccccggcggccacaccgccgcacgtcggcggtcggtggtcggta ctgcgtcgcgtcgacgtcgacccgaccaccgcggccgcggcgacctgcgagatcctcctc gaccggtacggcgtcgtcaccaagggctcggtggccgcggagtccaccgagggcggcttc gcccgcatctacaaggcgctcggcgtgttcgaggacaacggacaggtgcggcgcggctat tacatcgacggactgggcggcgcgcagttcgccgcaggccacaccgtcgacctgctccgc gagaccgtcgtcccgacgcgcgagcagcggtcggaggcggtggtgctggcgaccaccgat ccggcgaacccgtacggcgcagccctggactggcccgcccggtccgtcgagtcgggacat cgcccgggtcgcaagcccggtgcggtggtcgtgctggtggccgggcacgccgtcgtcttc gtcgagcgaggcggcaagaccgtcctgacgttcaccgacgacaccgacgcgctggaggcc gccgccgatgcgctgttccaggcggtgtccgccgggcgcatcccccggatccacatcgac caggtcgacggcgaacccgtccgccgcaccccgctcggcgagcagctcgtggccgccggg ttcgcgaccacgccgcgcgggctgcggatgaactacgatccgcggcggcgctga

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