Gordonia phthalatica: ACH46_08340
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Entry
ACH46_08340 CDS
T04097
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
goq
Gordonia phthalatica
Pathway
goq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACH46_08340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goq03400
]
ACH46_08340
Enzymes [BR:
goq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACH46_08340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACH46_08340
DNA repair and recombination proteins [BR:
goq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACH46_08340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-C2HC_3
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ALG84506
UniProt:
A0A0N9MNZ7
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All DBs
Position
1790214..1791095
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AA seq
293 aa
AA seq
DB search
MPELPEVETIRRGLAVHLAGRTVRDVEVLHPRAVRRHVGGGVDLASRLRGKHFDGVERRG
KYMWLLASDPADEVAAVVHLGMSGQMLIAEQGSDDPIHLRIRAVLDDGHELRFVDQRTFG
GWLLDDLVDTGARKLPESVAHIAADPFEESFDRDAVVSALRRRDTEIKRAILDQTVISGV
GNIYADESLWRAQLHGRRRTKGISRAKLGELVDHITDVMGEAIKVGGTSFDDLYVNVNGQ
SGYFERSLNAYGREALPCRRCETPMVREAFMNRSSFFCPTCQRVPSTRRSTGK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactccccgaagtggagaccatccgccgcggtctcgccgtgcatctggccggt
cggaccgtccgcgacgtcgaggtcctgcatccgcgtgctgtccgacgtcatgtcggcggc
ggcgtcgacctcgccagtcgattgcgcggcaagcacttcgacggcgtcgaacgtcgcggc
aagtacatgtggctgctcgcctccgaccccgccgacgaggtcgcggcggtcgtgcatctg
ggcatgagcggtcagatgctgatcgcggagcaggggagcgacgacccgatccatctgcga
atccgcgcagtgctcgacgacgggcacgaactccgcttcgtcgaccagcggaccttcggc
ggctggctgctcgacgacctcgtcgacaccggtgcccgcaagctccccgagtcggtggcg
cacatcgccgcagacccgttcgaggagagcttcgaccgcgacgccgtcgtctcggcgctg
cgtcgccgtgacaccgagatcaagcgcgcgatcctcgaccagaccgtcatctccggcgtc
ggcaacatctacgccgatgaatcgctgtggcgtgcccagctgcacggccgacgtcgtacg
aagggcatttcgcgtgccaagctcggcgaactcgtcgaccacatcaccgacgtgatgggg
gaggcgatcaaggtcggcggcacgtcgttcgacgacctgtacgtgaacgtgaacgggcag
tcggggtacttcgagcgctcgctgaacgcctatgggcgcgaagcacttccgtgtcggcgc
tgcgagacgccgatggtgcgtgaggcgttcatgaatcgaagttcgttcttctgcccgacg
tgtcagcgggtgccgagcaccagaaggtcgacagggaaatag
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