Gordonia phthalatica: ACH46_09150
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Entry
ACH46_09150 CDS
T04097
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
goq
Gordonia phthalatica
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goq03019
]
ACH46_09150
Enzymes [BR:
goq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACH46_09150
Messenger RNA biogenesis [BR:
goq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACH46_09150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
AAA_30
HA2_N
nSTAND3
AAA_23
NACHT
T2SSE
ABC_tran
SLFN-g3_helicase
TsaE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALG84631
UniProt:
A0A0N7FUK7
LinkDB
All DBs
Position
complement(1950941..1954645)
Genome browser
AA seq
1234 aa
AA seq
DB search
MSEPILAAESISTLTITYPPELPVSECRDEIAAAISAHQVVVIAGETGSGKTTQLPKICL
ELGRTSIGHTQPRRIAATSVAKRIADELGTELGAAVGYQVRFSDKVGKDTRIKVMTDGIL
LREIGRDPQLRGYDTIIIDEAHERSLNIDFLLGYLKRLLPRRPDLKLIITSATIEPDRFA
KHFAQADETVPILEVSGRTYPVEVRYRPRETDDSDHDDLDQIAAIDAAVGELWSHGRGDI
LVFLPTERDIRDTADALKRRSDADIVPLFARLSVAEQQKVFSPSNGRRIVLATNVAETSL
TVPGIRYVIDTGTARISRYSTRTKVTRLPVERVSQASARQRAGRCGRVAPGICIRLYSED
DFDARPEYTDPEILRSNLAAVILSMLSLRLGDVTDFPFVQPPDPRAIRDGMMLLSELGAV
TDTDSATARLTKVGKELARLPVEPRLGRMLVAGHDNGCLDHMLVIAAALALPDVREFPTD
KRDAATAAHRRHAVPGSEFLGQVKLWEYLAEQRKALSGNQFRKMCGREFLHYLRIREWLD
LHRQLSRTVRDLRWQTPTTAVDPAAIHRSVLSGLLTNVGVKQGDTREFLGTRGTKFSIFP
GSFLANKPPNFVVAAELMETSRLFAHTVASVDPLWVEEIAGDLVTRTYSEPHWSTRRGAV
MAHEKVSLYGVPLVAQRRVNYGPIDPKTSREIFIQEALVAGRWRNRHAFTKHNAELIAEA
EETEQRARRRNLRISDDDLFEFYAARIPANVVSTRHFDSWWKKAGRTDPTLLNLRPEEFL
DDDAPSAADFPAAWQQGETRLELRYHFEPGAPDDGVTVVIPRPLLQHVRDSGFDWLVPGM
RAELATALVKSLPKGLRKSMSPAARYADLALSRLTARAEPLLTGLARELSTISGVTLSPR
DFRPDNLPAHLRMHFAVVDAKGAIIARGDRLAAIRDDLDGGSGNTPATPIHRTWSADGLG
TLAESETATVAGQQITRYPTLLAVPGQGVRTAVAASTAERDAGIRAAAAELLRRSVQPPS
RRLANSLPPASKLALSQNPYRDIDALLADCTARAITDTLAAEKHLADLRTPTDFAELSAR
VSPVIRSRAPEYFVAAVAALAEYSPVRRAIDARSGTLAADDVADQTSNLVFDGFIGATAL
VHLRSLPRYLTAARLRLEGLATAGARDNEALASIDRVVAAWNRREAQLPASRHADLAELV
QWRLEELRVSLFAQQLGTSGSVSEQRIIKAIDKF
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccgattctcgcggccgagtcgatctcgaccctgaccatcacctatccccca
gaacttcccgtcagcgagtgtcgcgacgagatcgcggcggcgatctccgcacatcaggtg
gtggtcatcgcgggtgagacgggctcgggcaagaccacccagctgccgaagatctgcctg
gagctgggccgcacgtcgatcggtcacacgcagccgcgccgcatcgcggccacgtcggtc
gccaagcgaatcgccgacgagctcggcaccgaactcggtgccgccgtcggctaccaggtc
cgcttctccgacaaggtcggcaaggacacccggatcaaggtgatgaccgacggcatcctg
ctccgcgagatcggccgggatccgcagctccgcggctacgacacgatcatcatcgacgag
gcgcacgaacgcagcctcaacatcgacttcctgctcggttacctcaagcgcctgctgccc
cggcgacccgacctgaaactcatcatcacgtctgcgacgatcgagcccgaccgcttcgcg
aagcacttcgcccaggccgacgagaccgtgccgatcctggaggtctcgggacgcacctat
ccggtggaggtccgctaccgtccccgggagaccgacgactccgaccacgacgacctcgat
cagatcgcggcgatcgacgccgccgtcggcgagctgtggtctcacggtcgcggcgacatc
ctggtcttcctgccgaccgagcgcgacatccgcgacaccgccgacgccctgaagcgccgg
tccgacgccgacatcgtgccgctgttcgcgcgtctgtcggtcgccgagcagcagaaggtg
ttctcgccctcgaacggccgccggatcgtcctcgcgaccaacgtcgccgagacgtcgctg
accgtgcccgggatccgctacgtgatcgacaccggcacggcgcgcatctcccggtactcc
acgcgcaccaaggtcacgcgcctgccggtggaacgggtgtcgcaggccagtgcccgccag
cgcgccggtcgctgcggtcgcgtcgctcccggcatctgcatccgcctgtactccgaggac
gatttcgacgcccgccccgagtacaccgatcccgagatcctgcgcagcaacctcgccgcg
gtgatcctgtcgatgctgtcgctgcggctgggcgacgtgaccgacttcccgttcgtccag
ccgccggacccgcgcgcgatccgcgacggcatgatgctgctgtccgagctgggtgcggtc
accgacaccgactccgcgacggcgaggctcacgaaggtcggcaaggaactggcgcgcctg
cccgtcgagccgcggctcggccggatgctggtggccgggcacgacaacggctgcctggac
cacatgctcgtcatcgccgccgcgctcgccctgccggacgtgcgcgagttccccaccgac
aagcgcgacgccgcgaccgccgcccaccgcaggcacgccgtccccggatcggagttcctg
ggccaggtgaagctctgggagtacctcgccgagcagcggaaggccctgtccggcaaccag
ttccgcaagatgtgcggtcgcgagttcctgcactacctgcgtatccgggagtggctggac
ctccatcgacagctctcccgcaccgtgcgcgacctccgctggcagacacccacgaccgcg
gtggaccccgccgccatccaccgcagcgtgctgtccggcctgctcaccaatgtcggcgtc
aagcagggtgacacccgcgagttcctcggcacccgcggcaccaagttctcgatcttcccc
ggctcgttcctcgcgaacaagccgccgaacttcgtggtcgccgccgagttgatggagacc
tcccgcctgttcgcgcacaccgtcgcctcggtggatccgctgtgggtggaggagatcgcc
ggcgacctcgtcacccgcacatactccgaaccgcactggtcgacgcgccgcggcgccgtg
atggcacacgagaaggtgagcctgtacggcgtgccgctcgtcgcgcagcgccgcgtgaac
tacggaccgatcgatcccaagacctcgcgggagatcttcatccaggaggcactcgtcgcg
ggccgatggcgcaatcgtcacgccttcaccaagcacaacgccgagctgatcgccgaggcc
gaggagacggaacagcgtgcacgccgccgcaacctgcggatctccgacgacgatctgttc
gagttctacgccgcgcggatccccgcgaacgtcgtctccacccgccacttcgactcctgg
tggaagaaggccggtcgcaccgacccgaccctgctgaatctgcgacccgaggagttcctc
gacgacgacgccccctccgccgccgacttccccgccgcctggcagcagggcgagacccga
ctggaactgcgctaccacttcgagccgggcgctcccgacgacggcgtgaccgtcgtgatc
ccgcgaccgctcctgcagcacgtccgcgacagcggcttcgactggctggtgcctggcatg
cgcgccgagctcgcgacggccctggtgaaatcgctgcccaagggactccgcaagtccatg
tcaccggccgcgcggtacgccgacctcgctctcagccgcctcaccgcccgcgccgaaccg
ctgctcaccggtctcgcgcgcgaactgtcgacgatctcgggcgtcaccctctcgccgcgc
gacttccgacccgacaatctgcctgcgcacctgcgcatgcatttcgcagtcgtggacgcg
aagggtgcgatcatcgcccgcggcgaccgcctcgccgccatccgcgacgacctcgacggc
ggcagcggaaacaccccggcgaccccgatccaccgcacctggtccgccgacggtctcggc
accctcgccgagtcggagaccgcgaccgtcgccgggcagcagatcacccgctacccgacg
ctcctcgccgtaccgggccagggcgtccgcaccgcggtggccgcctccaccgccgagcgc
gacgcgggaatccgtgccgccgcagcggaactgctccgccggtcagtgcagccgccgagc
cgtcgactcgccaactctcttccgccggcctcgaagctcgccctcagtcagaacccgtac
cgcgacatcgacgccctgctggccgactgcacggcgcgcgccatcaccgacacgctcgcc
gccgagaagcacctggccgatctgcgaacgcccaccgatttcgccgaactgtccgcccgg
gtctcccccgtgatccggtcgcgcgcccccgagtacttcgtcgccgccgtcgccgcgctc
gccgagtactcacccgtgcgcagggcgatcgacgcccgcagcggcaccctcgccgcagac
gacgtggccgaccagacatcgaatctggtgttcgacgggttcatcggtgccaccgcgctg
gtgcacctgcggtcgctgccccgctacctcaccgccgcccgactgcgtctggaaggactg
gccaccgcgggtgctcgggacaacgaagccctcgcttccatcgaccgcgtggtcgcggcg
tggaaccgtcgcgaagcccagttgcccgcgtcgcgacacgcggatctggccgaactggtc
cagtggcgcctcgaagaactgcgcgtcagcctgttcgctcagcagctcggcaccagcggt
tcggtgtccgaacagcgcatcatcaaggcgatcgacaagttctga
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