Gordonia phthalatica: ACH46_10520
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Entry
ACH46_10520 CDS
T04097
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
goq
Gordonia phthalatica
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
goq03019
]
ACH46_10520
Enzymes [BR:
goq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACH46_10520
Messenger RNA biogenesis [BR:
goq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACH46_10520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
AAA_30
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALG84854
UniProt:
A0A0N9NCQ1
LinkDB
All DBs
Position
2238773..2241517
Genome browser
AA seq
914 aa
AA seq
DB search
MTTDDLDRPGPQLTAFSDRIGFTLDPFQQQACAALETGRGVLVCAPTGAGKTIVGEFAVH
LALAHGTKCFYTTPIKALSNQKFHDLAEAHGAENVGLLTGDNSINSSAPVVVMTTEVLRN
MLYAESSTLRGLSHVVMDEVHFLADRFRGAVWEEVILGLDPSVHVVSLSATVSNAEEFGD
WITTVRGDTAVIVDETRPVPLHQHMLVGKRMFGLFDRKHPKQVNPELTRYIKHRMLSDDA
VGNYRERLARERRRGGTGISRPTMVRLLDENGLLPAIAFIFSRKGCDGALVQCLRSDLNL
LEPQEAATVDEIVERHLLALSPGDADVLGVEEWRAGLRRGFAAHHAGLLPMFRQAVEELF
VAGLVKVVFATETLALGINMPARSVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDV
EGHAVVLWTPEVIPDRVAGLAGARTFPLRSSFAPEYNMAMNMIDRLGVEGSRDLLRRSFA
QFQTDRSVVGQARQLDRARMTIRKINSELAHATERKGLEADAFLEYVTLRDDIKQRERSA
KFLRRMEATEAVSEDLLALKSGHVIGLNTGRHRGLAVVLHAATIDLDPRPLVLCEDGWTG
RVGVRDFVNPPEVLGHLRIPKSANRRSAHGRREIIGMLRSSGIERPTGRNTKKSKQPSMA
DRQLQELKTRLRKHPVHKMNGLDDLHRLSERRQRLLRDISGLERAVDERTAALETEFDAI
TGVLTELSYLEIDDSGELVVTPTGSVLRRIYSESDLVVAECIRAGIWDRLAPPDLAAVVS
TMVYESRRDSYAGGVDSMPGNKELRDALVATVEVWEATNAIQDRHGVVQTREPDTGFCVA
IGAWAAGRSLREALLAASERGQLLSPGDFVRWNRQVIDLLEQVRGSVDPDAPLASAARRA
VKAVRRGVVASELD
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacgacctcgaccgacccggcccgcagctcacagcgttcagcgaccggatc
ggcttcaccctcgatcccttccaacagcaggcgtgtgccgccctcgagacggggcggggc
gtcctcgtgtgcgccccgaccggagcgggcaagacgatcgtcggcgagttcgccgtccac
ctcgcactggcccacggcaccaagtgcttctacacgacgcccatcaaggccctcagcaat
cagaagttccacgacctcgccgaagcgcacggcgccgagaacgtcggcctcctgaccggt
gacaattcgatcaactcgtcggcgccggtggtcgtgatgaccaccgaagtccttcgcaac
atgctctacgcggagtcctcgacgctccgcggactctcgcacgtggtgatggacgaggtg
catttcctggccgaccgcttccgcggcgcggtctgggaggaggtgatcctcgggctggac
ccctcggtccacgtcgtgagtctgtcggcgaccgtcagcaacgccgaggagttcggcgac
tggatcaccacggtccgcggcgacaccgccgtcatcgtcgacgagacccggccggttccg
ctgcaccagcacatgctggtggggaagcggatgttcggtctcttcgaccgcaagcatccc
aaacaggtgaatcccgaactcactcgttacatcaagcaccggatgctctccgacgacgcc
gtcgggaactaccgcgaacgcctggcgcgcgaacgtcggcgcggcggaaccgggatctcg
cgtcccacgatggtccggcttctcgacgagaacggtctgctgcccgcaatcgccttcatc
ttctcccgcaaggggtgcgacggcgcgctcgtccagtgcctgcgatcggatctcaacctg
ctcgagccgcaagaggcggccacggtcgacgagatcgtcgaacggcatctcctggcgctc
tcacccggcgacgccgacgtgctcggcgtggaggagtggcgggccggcctgcgtcgcggt
ttcgccgcgcaccacgccgggctgctcccgatgttccgacaggccgtcgaggaactgttc
gtcgcaggcctggtgaaggtcgtcttcgccacggagaccctcgccctgggcatcaacatg
cctgcgcgcagcgtggtcctcgaacggctggtgaagtacaacggcgaagcacacgtcgac
ctgacaccgggggagtacacgcagctcaccgggcgcgccggccgacgcggcatcgacgtc
gaggggcacgcggtggtcctgtggaccccggaggtgatccccgaccgagtcgcaggcctc
gccggtgcccgcaccttcccgctgcggagctcgttcgcgcccgagtacaacatggcgatg
aacatgatcgaccgactgggggtggaggggtcgcgcgacctcctgcggcggtcgttcgcg
cagttccagaccgaccgttcggtggtcggccaggcgcgacagctcgaccgtgcacggatg
acgatccggaagatcaactccgagctcgcccacgccacggagcgcaagggcttggaggcc
gacgcgttcctcgagtacgtgaccctgcgcgacgacatcaagcagcgggagcggtcggcg
aagttcctgcgccggatggaggccaccgaggcggtgtccgaggatctgctcgcgctgaag
tccgggcacgtgatcggcttgaacaccggacggcaccgcggtctggcggtggtgctgcac
gcggcgacgatcgacctggatccgcgtccgctggtcctctgcgaagacgggtggacgggc
cgggtcggggtgcgcgacttcgtgaacccgccggaggtcctcggccacctgcggatcccg
aagtcggcgaatcgccgcagcgcacacggtcgtcgcgagatcatcggcatgctccgatcc
agcgggatcgagcggcccaccggacgcaacacgaagaagtccaagcagccgagcatggcc
gaccgccagttgcaggagctgaagacccgcctgcggaagcatccggtgcacaagatgaac
ggcctcgacgatctgcaccggctctccgaacggcggcagcgactgctgcgcgacatcagc
ggactggaacgcgccgtcgacgagcggaccgcagccctggagaccgagttcgacgcgatc
accggcgtcttgacggagctgtcgtacctggagatcgacgactccggtgaactggtcgtg
acaccgaccggctcggtgctccggaggatctattcggagagcgacctggtggtggccgaa
tgcatccgggccgggatctgggatcggctcgcaccgccggatctcgcggccgtggtgtcg
accatggtctacgagtcacgacgcgactcgtatgcgggcggcgtcgattcgatgccgggc
aacaaggagttgcgggacgcgttggtcgccaccgtcgaggtctgggaggccaccaacgcg
atccaggatcgccacggagtcgttcaaacacgcgaaccggataccggattctgcgtcgcg
atcggagcgtgggctgccggtcgatccctgcgggaggcgctgctggcagcctccgaacgt
ggtcaactcctctctcccggcgacttcgtgcgatggaatcgccaggtcatcgacctgttg
gagcaggtccgcggcagcgtcgacccggatgcgccgctcgcgagtgccgcacggcgcgct
gtcaaggcggtacggcgcggtgtcgtggcgtccgaattggattga
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