Gordonia phthalatica: ACH46_14050
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Entry
ACH46_14050 CDS
T04097
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
goq
Gordonia phthalatica
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
goq03032
]
ACH46_14050
03036 Chromosome and associated proteins [BR:
goq03036
]
ACH46_14050
03400 DNA repair and recombination proteins [BR:
goq03400
]
ACH46_14050
DNA replication proteins [BR:
goq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACH46_14050
Chromosome and associated proteins [BR:
goq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ACH46_14050
DNA repair and recombination proteins [BR:
goq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ACH46_14050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HC2
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
ALG85393
UniProt:
A0A0N9NCH9
LinkDB
All DBs
Position
complement(3018835..3019503)
Genome browser
AA seq
222 aa
AA seq
DB search
MNKAELIEELTKRLDADRKTATSFVEQTIDAIVRAVNKGESVTITGFGVFEKRRRAARVA
RNPRTGETVKVKATSIPAFRPGAQFKAIVSGKQKLKVGQPAVKRASAAEPAEAAKKTAAK
TATAAKKTAAKKTTAAKTTAAKTTAAKKTTAAKKAAPAKKTTAAKKAAPATKTAAKKATP
AKKTAAAKKATPAKKTAAKTTAAKKTAAKKTAAKKTTPKKDA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaactcatcgaggaactgacaaaacgcctcgatgccgacaggaagacc
gcgaccagtttcgtcgagcagacgatcgacgccatcgtgcgcgccgtcaacaagggcgag
agcgtcacgatcaccggcttcggtgtcttcgagaaacgacgacgcgcagcacgcgtcgcg
cggaacccgcgcaccggcgagaccgtcaaggtcaaggcgacgtcgatcccggcgttccgt
ccgggcgctcagttcaaggcgatcgtctccggcaagcagaagctcaaagtgggccagccc
gcagtgaagcgagcctcggccgccgagcccgccgaggctgcgaagaagacggctgccaag
acggcgacggccgcgaagaagaccgctgcgaagaagaccacggcggccaagaccacggcg
gccaagaccacggcggccaagaagaccacggctgcgaagaaggccgctcccgcgaagaag
acgaccgcggccaagaaggcggcaccggccacgaagaccgcggcgaagaaggcgacgccc
gcgaagaagaccgcggctgccaagaaggcgacgcccgccaagaagacggcagccaagacg
accgccgcgaagaagaccgcggccaagaagaccgctgcgaagaagacgaccccgaagaag
gacgcctaa
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