Gordonia phthalatica: ACH46_15045
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Entry
ACH46_15045 CDS
T04097
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goq
Gordonia phthalatica
Pathway
goq03420
Nucleotide excision repair
goq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACH46_15045
03430 Mismatch repair
ACH46_15045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goq03400
]
ACH46_15045
Enzymes [BR:
goq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACH46_15045
DNA repair and recombination proteins [BR:
goq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACH46_15045
MMR (mismatch excision repair)
Other MMR factors
ACH46_15045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_11
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ALG85549
UniProt:
A0A0N9NAY6
LinkDB
All DBs
Position
complement(3210858..3212897)
Genome browser
AA seq
679 aa
AA seq
DB search
MTTAMGQRVEGGATAGLDPDQLEAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVESGQVN
PEQVLAVTFTSRAAAEMRERLASLGVSGPGNSVAAQTFHAAAMRQLRYFWPMTFGDLRWD
LLEHKFRMVARVAREVGIDVSDRDLLRDLSSEIEWAKSSAIGPDQYADAAQRAHRDVPTD
PRTVMQVFAAYEAAKVAPNGDRLLDFEDLLIYTTMILQSDPSIGEEFRSRYRSFVVDEYQ
DVTPIQQNLLDAWLGGRDDLTVVGDANQTIYSFTGATPSYLLDFTRRFPDATLVRLQRDY
RSTPQVVNLANEAIGKARGRIAGTRLQLVGQRDAGPEPVFAGYDDEISEVVGVVAEIRKR
IRAGVPASEIAVLYRVNAQSEAYEEALAEAGIDYQVRGAQSFFERPEIVAAMRRLTSLAG
GPPPPMQPVDAVRHALHQVGLTESEPKGANARARWQQLLRLVEIVETIASEAPELDFAGV
VGKLDERSRMRHAPIGGGVTLSSMHAAKGLEWDAVFLTGLHEGSMPLGRASKTVDEVEEE
RRLFYVGITRAREHLHLSWSLSRGEGRGTKRRRSRFLDALVPAPSAGLDLEPLPERTEPD
PDVLKALTVWRKEFAESHEIMESNVMSKTMVRTIATAVPTTLEDLAKVRGFGRARTDEIG
AAVIAVVDSALPGKTAGRK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggcgatgggacagcgggtggaaggcggagcgacggcgggactggatcccgac
cagctcgaagccgtcctcgcaccccgggggccggtctgcgtcctcgccggcgccgggacc
ggcaagacgcgcaccatcacgcggcggatcgcgcacctcgtcgaatcggggcaggtcaat
cccgagcaggtcctggccgtcaccttcacctcgagggctgcggccgagatgcgggagcga
ctcgcctccctcggtgtctcggggccggggaactcggtcgccgcgcagaccttccacgcc
gcagccatgcgtcaactccgctacttctggccgatgaccttcggcgacctgcgctgggac
ctcctggaacacaagttccggatggtggcgcgggtggcgcgcgaggtcgggatcgacgtg
tccgatcgcgacctgttgcgcgatctgtcctcggagatcgagtgggccaagtcgtcggcg
atcgggccggaccagtacgccgacgccgcgcagcgcgcacaccgggacgtgccgaccgat
ccgcggacggtgatgcaggtgttcgccgcgtacgaggccgcgaaggtcgcaccgaacggc
gaccgcctcctcgacttcgaggacctgctcatctacacgacgatgatcctgcagtccgat
ccgtcgatcggcgaggagttccggtcgcgctaccgcagcttcgtggtggacgagtaccag
gacgtcacgccgatccagcagaatctgctcgacgcgtggctcggcggccgcgacgacctc
accgtcgtcggcgacgccaaccagacgatctacagcttcaccggcgccacgccgtcgtac
ctgctggatttcacgcgacggttcccggacgcgacgctcgtccgcctgcagcgcgactac
cggtccaccccgcaggtggtgaacctggccaacgaggccatcggcaaggcccgcgggcgg
atcgcaggcacccgactgcagctggtggggcagcgcgacgccggtcccgaaccggtgttc
gcgggctacgacgacgagatctccgaggtggtcggtgtggtcgccgagatccgcaaacgg
atccgcgcaggggtgcccgcctccgagatcgccgtgctgtaccgcgtgaacgcccagtcc
gaggcctacgaggaggcgctggcggaggcaggcatcgactaccaggtccgcggcgcgcag
agcttcttcgaacgacccgagatcgtggcggcgatgcgacgactcacctccctcgcgggc
ggtccgccgccgcccatgcagcccgtcgacgcagtccggcacgcgctgcaccaggtgggg
ctcaccgagtccgagccgaagggcgccaacgcccgcgcgcgatggcagcagttgttgcgc
ttggtcgagatcgtcgagaccatcgcctccgaagcgccggaactggacttcgccggtgtc
gtcggcaagctcgacgaacgttcgcggatgcggcacgcgccgatcggcggcggcgtcacc
ctgtcgtcgatgcacgcggcgaagggcctcgagtgggatgcggtcttcctgaccggactg
cacgagggatccatgccgctgggccgcgcctcgaagaccgtcgacgaggtggaggaggaa
cgtcggctcttctacgtcggcatcactcgagcgcgcgagcacctgcacctgtcgtggagc
ctctcgcgaggggaggggcgcggcaccaagcgccgtcggtcccgattcctcgacgccctg
gtgcccgcgccgtcggccggcctggacttggaaccgctgcccgagcgcaccgaaccggat
ccggacgtcctgaaggcgctgaccgtgtggcgcaaggagttcgcggagtcgcacgagatc
atggagtcgaacgtgatgagcaagacgatggtccgcaccatcgcgaccgcggtgccgacc
acgctcgaggacctcgcgaaggtccgcgggttcggcagagctcgcacggacgagatcggt
gccgcggtcatcgccgtcgtcgattccgccttgccgggtaaaaccgcaggtagaaaataa
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