Gordonia phthalatica: ACH46_15065
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Entry
ACH46_15065 CDS
T04097
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
goq
Gordonia phthalatica
Pathway
goq03420
Nucleotide excision repair
goq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
goq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACH46_15065
03430 Mismatch repair
ACH46_15065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goq03400
]
ACH46_15065
Enzymes [BR:
goq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACH46_15065
DNA repair and recombination proteins [BR:
goq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACH46_15065
MMR (mismatch excision repair)
Other MMR factors
ACH46_15065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ALG85552
UniProt:
A0A0N9NEK4
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All DBs
Position
complement(3215384..3218746)
Genome browser
AA seq
1120 aa
AA seq
DB search
MTDTVHADRRPMIGARSLAAALGLPPPTDEQIEVIEAPLEPMLVVAGAGAGKTETMASRV
VWLVANRLVGPEEILGLTFTRKAASELAARIRRRLSMLAGSPALLEWDPGGELASRLRSA
DAEVSTYHAYAGRLIADYGLLLPVEPTATLLSETELWQLAFSVVTTWPGALTTSKVPSSV
TEAVLRLYSEMAEHLVDVEELQAAGEDLYRMIDTLPKGKGQRAEPSQNLRKIQAVMDERR
ELIPLVIALREAMAAQGALDFGSQMSLAARLVATHPEVVDAERASIRAVLLDEYQDTGHS
QRILLSSLFGGHAVAGRRPIAVTAVGDPIQSIYGWRGASAANLPRFARDFPRADSRDAPR
RELLTSWRNCVNALYLANESSEELRRRGVPVSVLRPRPDAPAGTVRLALTETVIDEREWI
ADRIEDYYRAAERDETAPPTTAILVRRNEDSAPLAAELERRGIPAEVVGIGGLLHVPEIT
DIVATLRLMADPMAGTAAVRLLTGARWQLGAADLAALWRRARELTAGTGAPTTGAVTSRE
ALDDALDAALPGEAVDSAGLCDALADPGDPSRYSAAGYERITTFGAQLESLRRRIGQPLP
ELVADVEQTIGVAVEAQIRARRMRGEVTGREHLDAFAEYVTHYAERSGATLPGLLSFLET
AEVVEKGLEAGQVEVAAQRVQILTVHAAKGLEWDVVALPHVADRIFPSGKAETTWLGSAK
ELPAELRGDLSRDGDEGFPPLDLTEVSDRKELEQAIDDHKAAIGERRLEEDRRLLYVALT
RAKHTLLVSAHHWSETGDKPRGGSEFYTELAALVADGAAGAAGDRADPSGLSIDVDAPPP
APDASNPLTEQQISVDWPVDLLGDRRAPMVAAAELVAAARAERALFAVADAEPTDLDARE
WQREVTVLLEEKAQTVDPVVDVELPGHLSVSQLVELDSDEEAFAARLRRPVPYRPNPMAR
RGTAFHAWVERRFGATRLLDVDELPGAADAAAGAVEDDLDLLRSKFLASPWADRTPQEVE
VGFETVIGSTVVRGRIDAVFADGDGALVVDWKTGAVPEPAKRKALFIQLAAYRVAWSQLS
GIPLDRVRAAFVYVRHDFTLEPADLPGPDALARMLTERMQ
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacggttcacgctgatcgccgaccgatgatcggcgcccgctcgctcgccgcc
gcgctgggactgccgccgcccaccgacgaacagatcgaggtcatcgaggcaccgctcgaa
ccgatgctcgtggtcgcgggcgccggtgcgggcaagaccgagaccatggcgtcgcgcgtg
gtgtggctggtcgccaaccgcctcgtcggcccggaggagatcctcggcctcaccttcacc
cgcaaggccgccagcgagctggcagcacgcatccgtcgccgcctgtcgatgctcgcgggc
agcccggcgctcctcgaatgggatccgggcggcgaactcgcgagccggctccgcagcgcg
gacgccgaggtcagcacctatcacgcctacgccggacgcctgatcgccgactacggcctg
ctgctccccgtcgaaccgacggccacactcctctccgagaccgagctgtggcagctcgcg
ttctcggtcgtcaccacctggccgggagcactgaccaccagcaaagtgccgtcgtcggtc
accgaagcggtgctgcggctgtactcggagatggccgagcacctcgtcgacgtcgaggag
ctgcaggccgcgggcgaggacctgtaccggatgatcgacaccctccccaaggggaagggg
cagcgggcggaaccgagccagaacctgcggaagattcaggcggtgatggacgagcgccgg
gagctgatcccgctcgtcatcgccctgagggaggcgatggccgcgcagggcgccctcgac
ttcggcagtcagatgtcgctggccgcccgactcgtcgcgacgcaccccgaagtggtcgac
gccgaacgcgcgagcatccgcgcggtgctcctggacgagtaccaggacaccggccactcg
cagcggatcctgctgtcgtcgctgttcggcggccacgccgtcgccggtcgcaggcccatt
gcggtgaccgcggtcggcgacccgatccagtccatctacggctggcgcggcgcatcggcc
gccaacctgccgcgattcgcccgcgacttcccccgcgcggacagccgcgacgccccgcgt
cgagaactgctgaccagctggcgcaactgcgtcaacgccctgtacctcgcgaacgagagc
tccgaggagctgcgccgccgcggcgtgccggtgagcgtcctgcgcccgcgtcccgacgcg
ccggcgggcacggtccgactggcgctgaccgagacggtgatcgacgagcgcgagtggatc
gccgaccgcatcgaggactactaccgggcggccgaacgcgatgagaccgcgccgcccacc
accgcgatcctggtgcgccgcaacgaggactcggcaccgctggccgcagaactcgaacgt
cgcggcatccccgccgaagtggtcggcatcggcgggctgctccacgtcccggagatcacc
gacatcgtcgccaccctccggctgatggccgatccgatggccgggaccgccgccgtgcga
ctgctcaccggagcacgctggcagctcggcgccgcggacctggccgccctgtggcgccgt
gcccgcgaactgaccgcgggcaccggagctccgacgaccggcgccgtgaccagccgagaa
gcactcgacgacgccctcgacgccgcgctgccgggcgaggccgtcgactccgcgggcctg
tgcgacgccctcgccgatcccggcgaccccagccggtatagcgcggcggggtacgagcgg
atcaccaccttcggcgcccagttggagagcctgcgacggcggatcgggcagccgctgccc
gaactcgtcgccgacgtcgagcagaccatcggcgtcgcggtggaggcacagatccgggcc
cgtcggatgcgcggcgaggtgaccggtcgcgagcacctcgacgccttcgccgaatacgtg
acgcactacgcagaacggtccggcgccaccctgccgggcctgctctcgtttctggagacc
gccgaagtggtggagaagggcctcgaagccgggcaggtggaggtggcggcgcagcgcgtg
cagatcctcaccgtgcacgccgccaagggcctggaatgggatgtggtggcgctgccgcac
gtcgccgaccggatcttcccgagcggcaaggccgagaccacctggctgggatcggcgaag
gagttgcccgccgaactccgcggcgacctctcccgagacggcgacgagggcttcccaccg
ctcgacctcaccgaggtctccgatcgcaaggagctggagcaggcgatcgacgatcacaag
gcggcgatcggggagcggcgcctggaagaggaccggcgcctgctgtacgtggccctcacc
cgtgccaagcacacgttgctcgtgtcggcgcaccactggtccgagacgggtgacaaaccg
cgcggcggatccgagttctacaccgagctcgccgcactggtggcggacggcgccgcggga
gcggcgggcgaccgcgcggatccgagcggcctgtcgatcgacgtcgacgcgccgccgccc
gcgccggatgcgagcaacccgctcaccgagcagcagatcagcgtcgactggccggtggat
ctcctcggcgatcggcgggcgccgatggtggccgctgcggaactggtcgccgcggcccgc
gccgaacgcgcgctgttcgccgtcgccgacgccgaacccaccgacctcgacgcccgcgaa
tggcagcgggaggtgacggtcctgctggaggagaaggcgcagacggtcgaccccgtcgtc
gacgtggagctccccgggcacctgtcggtgagccagctggtggaactcgactccgatgag
gaggcgttcgccgcgcggctgcgtcgacccgtcccgtatcgccccaacccgatggcgcgc
cgcggcaccgcgttccacgcctgggtggaacgccggttcggcgccacccggctgctcgac
gtcgacgagctgcccggtgccgccgacgcggcggccggcgccgtcgaagacgacctggat
ctgctgcgcagcaagttcttggcgtcgccgtgggccgaccgcacaccgcaggaggtggag
gtgggattcgagaccgtcatcggctccacggtggtccgcggtcggattgacgcggtcttc
gccgacggcgacggcgcgctggtggtggactggaagaccggcgcggtccccgaacccgcc
aagcggaaagcgctgttcatccagctcgccgcctatcgggtcgcgtggtcgcagctgtcc
gggatcccgctcgacagggttcgcgcggcattcgtctacgtccgacacgacttcactctc
gaacccgcggatctgcccggcccggacgcgcttgcgcgaatgctgaccgagcggatgcag
tag
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