Gordonia sp. KTR9: KTR9_0007
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Entry
KTR9_0007 CDS
T02216
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gor
Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gor03032
]
KTR9_0007
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_0007
Enzymes [BR:
gor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KTR9_0007
DNA replication proteins [BR:
gor03032
]
Prokaryotic type
DNA Topoisomerases
KTR9_0007
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KTR9_0007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AFR46675
UniProt:
J9RZL1
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Position
7710..10199
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AA seq
829 aa
AA seq
DB search
MTDTTLPPAGGEGDRIEPVDLGQEMQKSYIDYAMSVIVGRALPEVRDGLKPVHRRLLYAS
FDAGFRPDRSYVKSAKPVAETMGNYHPHGDTAIYDALVRLAQPWSMRYPLIDGQGNFGSR
GNDGAAAMRYTEARLTPLAMEMLRDITEETVDFVPNYDGKTNEPTVLPSRIPNLLINGSG
GIAVGMATNMPPHNLNEVAEAVFWALENHDADDETTLAACMECIKGPDFPTAGLIVGSQG
IKDAYTTGRGSIRMRSVVDIEENKGATTLVVTELPYQVNPDNLIQSIAEQVNEGKLKGIS
RIEDQSSDRVGMRIVVTLRRDAVAKVVLNNLYKHSQLQTSFGANMLSIVDGVPRTLRLDQ
MIRYYVAHQIDVIVRRTRYRLRKAEERAHILRGLVKALDALDEVIALIRRSANTETARTG
LIDLLDIDEIQADAILAMQLRRLSALERQKIVDELAEIELEIADYKDILDRPERQRAIVR
DELKEVVDKYGDERRTKIIAADGDVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQRRG
GKGVQGAGLKQDDIVKHFFVCSTHDWILFFTTKGRVYRAKAYELPEANRTARGQHVANLL
AFQPEERIAQVIQLKTYEDAPYLVLATRNGLVKKSRLVDFDSNRSGGIAAINLRGEDELV
GAQLCSADDDLLLVSQKGQSIRFHADDEALRPMGRQTSGVQGMRFNTDDTLLSLNVVRDG
TYLLVATSGGYAKRTGMDDYPVQGRGGKGVLTIAHDRRRGELIGALIVDDDSELYAITSG
GGVIRTTAKSVRKAGRQTKGVRLMNIDEGTTVIAIARNADEPDETEVSS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccactctgccgcccgccggaggcgaaggcgatcgcatcgagcccgtcgat
ctcgggcaggagatgcagaagagctacatcgattacgccatgagcgtgatcgtggggcga
gcactccccgaggtgcgcgacggcctgaagccggtgcaccgccgtctcctctacgcgtcc
ttcgatgccggtttccggccggaccgcagttatgtgaagtccgcgaaacccgttgcggag
acgatgggtaactatcacccgcacggcgacacggcgatctacgacgcgctcgtccgactc
gcccagccgtggtcgatgcgctacccgctcatcgacgggcagggcaacttcggctcgcgc
ggcaacgacggtgcggccgcgatgcggtacaccgaggcgcgtctcacgccgctcgccatg
gagatgttgcgtgacatcaccgaggagacagtcgatttcgtccccaactacgacggcaag
acgaatgagccgacggtactgccgtcgcgcatcccgaacctgctgatcaatggctccggc
ggtatcgccgtcggcatggccaccaacatgcctccgcacaacctcaacgaggttgccgag
gcggtgttctgggcgctggagaatcacgacgccgacgacgagaccaccctcgccgcctgc
atggagtgcattaagggacccgacttccccacggccggactgatcgtcggcagccagggc
atcaaggacgcctacacgaccggtcgcggcagcatccggatgcgcagcgtcgtcgacatc
gaggagaacaagggagccaccacgctggtggtaaccgagttgccgtaccaggtcaacccg
gacaacctgatccagtcgatcgccgagcaggtcaacgagggaaagctcaagggcatcagc
cggatcgaggatcagtcctcggaccgcgtcggtatgcgcatcgtggtgacactgcgtcgt
gacgccgtcgccaaggtcgtgctgaacaacctgtacaagcacagccagctccagaccagc
ttcggcgccaacatgctatcgatcgtcgacggcgtgccgcgcacgctgcgactcgaccag
atgatccgctactacgtggcgcatcagatcgacgtcatcgtgcgtcggacccggtaccgg
ttgcgcaaggccgaggagcgcgcgcacatcctgcgcggtctggtgaaagctcttgacgcc
cttgacgaagtgatcgcgctgatccgccgctcggcgaacaccgagaccgcacgcaccggc
ctgatcgacctcctcgacatcgacgagatccaggccgacgccatcctcgcgatgcagctg
cgccggctgtcggcattggagcggcagaagatcgtcgacgagctcgccgagatcgaactc
gagatcgccgactacaaggacatcctcgaccggccggagcgtcagcgcgcgatcgtgcgc
gacgagctcaaggaggtcgtcgacaagtacggcgacgagcgtcgtacgaagatcatcgcg
gccgacggcgacgtcagcgacgaggatctgatcgcgcgtgaggacgttgtcgtcacgatc
accgagaccgggtacgccaagcgcaccaagaccgacctgtaccgcagccagcgtcgcggc
ggcaagggcgtgcagggtgccggcctcaagcaggacgacatcgtcaagcacttcttcgtg
tgctcgacccacgactggattctgttcttcacgaccaagggacgggtctaccgcgccaag
gcctacgagctgcccgaggccaaccgcaccgcgcgcggccagcacgtcgccaacctcctc
gccttccagccggaggagcgcatcgcccaggtcatccagctcaagacctacgaggatgcc
ccgtacctggtgctcgccacccgcaacggcctggtcaagaagtcccgcctggtcgacttc
gactcgaaccgctccggcggcatcgcggcgatcaacctgcgcggtgaggacgaactggtc
ggcgcccagttgtgcagcgccgacgacgatctgctcctggtgtcgcagaagggacagtcg
atccgcttccacgccgacgacgaggccctgcggcccatgggccggcagacctcgggcgtc
cagggcatgcggttcaacaccgacgacacgctcctgtcgctcaacgtcgtccgcgacggc
acctacctcctggtcgcgacctccggtgggtacgccaagcggaccggcatggacgactac
ccggtgcagggccgcggcggcaagggtgtgctgacgatcgcccacgatcgacggcgcggc
gaactgatcggcgccctcatcgtcgacgacgactccgagctctacgccatcacctcgggc
ggcggcgtcatccgcacgacggcgaagtcggtccgcaaggccggtcgccagaccaagggt
gtgcgcctgatgaacatcgacgagggaacgacggtcatcgcgatcgcccgcaacgccgac
gagccggacgagacagaggtctcttcctag
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