Gordonia sp. KTR9: KTR9_0360
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Entry
KTR9_0360 CDS
T02216
Name
(GenBank) Pseudouridylate synthase, 23S RNA-specific
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
gor
Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gor03009
]
KTR9_0360
03016 Transfer RNA biogenesis [BR:
gor03016
]
KTR9_0360
Enzymes [BR:
gor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
KTR9_0360
5.4.99.29 23S rRNA pseudouridine746 synthase
KTR9_0360
Ribosome biogenesis [BR:
gor03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KTR9_0360
Transfer RNA biogenesis [BR:
gor03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
KTR9_0360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFR47026
LinkDB
All DBs
Position
423348..424217
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AA seq
289 aa
AA seq
DB search
MVLRSGPEVTVGQALLAAPSLAGLTTEDLRRRSAAGEIVDADGRPADLDSPSRPNISLYL
YRDLDDEVPVPFDLPVLYRDENIVVVDKPHFLATMPRGRHVTETALVRLRRELGSDTVSP
AHRLDRLTAGVLLFTLRPEVRAAYQHLFAARAARKEYLALAPADEALGTSVTVRDRIEKT
AGDLRALVVDGPVNAISDITLVDAAGRHGVYRLVPHTGRTHQLRLHMASLGVPIVDDPLY
PDVRPDLAARPDHGDFSRPLRLLARVLEFTDPLTGEHRRFESMRTVSKG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtggtcctgcggtcgggcccggaggtgacggtggggcaggcgctgctggcagcgcccagt
ctggccggactgaccaccgaggacctgcgtcgacggtccgccgccggtgagatcgtcgac
gccgacggccgccccgcggatctcgattcgccgtcgcggcccaacatctcgctgtacctc
taccgggatctcgacgacgaggtgccggttccgttcgacctgccggtgctctaccgcgac
gagaacatcgtcgtcgtcgacaaaccgcattttctcgccacgatgccccggggtcggcac
gtgaccgagaccgcgctcgtccggctgcgccgggagttgggctccgacaccgtgtcgccg
gcccaccggctggaccggctcacggccggagtgctgctgttcaccctccggccggaagtg
cgggcggcctatcagcacctgttcgcagcccgggccgctcgcaaggaatacctcgcgctc
gcaccggccgacgaggcgctcggcacgagcgtgaccgtccgggaccggatcgagaagacc
gcgggcgacctgcgtgctctcgtcgtcgacgggcccgtcaacgccatcagtgacatcacg
ctcgtcgatgctgcaggccgccacggcgtctaccgtctggtgccgcacaccggccgcacg
catcagctccggctgcacatggcgtcgctcggagtacccatcgtcgacgacccgctgtac
cccgacgtgcgtccggatctcgcggcgcgccccgatcacggggatttctcgcggccgttg
cgccttctggcgcgggtcctggagttcaccgacccgctgaccggtgagcaccgcaggttc
gagagcatgcggacggtgtcgaaggggtag
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