Gordonia sp. KTR9: KTR9_1179
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Entry
KTR9_1179 CDS
T02216
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gor
Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_1179
Enzymes [BR:
gor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KTR9_1179
DNA repair and recombination proteins [BR:
gor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KTR9_1179
Prokaryotic type
KTR9_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFR47819
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Position
1332435..1333646
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AA seq
403 aa
AA seq
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MCFVVDPRLEKSSGERRLAFLFDSLRELDDKLDGKLLVVRGRPEVEIPKLAHAVDAERVH
ISEDFAPFGRRRDEAVADRLGDIELVATGSPYLVSPGRVTKNDGEPYKVFTPYFNRWRDH
GWRAPADSSVPSASIVDPSDLSKTGRIRVPAAPTKLSIPAGEDAATARWAEFVDDGLTDY
DSGRNDPAGDSTSRMSAYLKYGNIHPRTLAADLGNQKGKGAQAYLRELAFRDFYADVLYH
WPHSLWHNWNRQFDGIDLDTDDKAYERFDAWKAGRTGFPLVDAGMRQLAETGYMHNRVRM
VTASFLVKDLHLPWWWGAEWFLEQLVDGDMASNNHGWQWAAGTGTDAAPYFRVFNPEAQA
KKFDPDGEYVRRWVGDIDADDYPEPMVDHKAEREEALRRFGQI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgtgctttgtggtggacccgaggctggagaagtcctcgggtgagcggcgcctggcgttc
ctgttcgactcgctgcgcgagttggacgacaagctggacggcaagttgctcgtcgtgcgg
ggacgacccgaggtggagatcccgaagctggcccacgcggtcgacgccgaacgggtgcac
atctccgaggacttcgccccgttcggccggcgacgcgacgaggccgtcgccgatcggctc
ggcgacatcgagctcgtggcgaccggttcgccgtacctcgtctcgcccggccgggtgacc
aagaacgacggcgagccgtacaaggtcttcaccccgtacttcaaccgctggcgtgaccac
gggtggcgcgcaccggccgattcctcggtgccttcggcgtcgatcgtcgacccgtcggat
ctgtcgaagacgggacgcatccgggttcccgccgcgccgacgaagctgtctatccccgcg
ggcgaggacgcggcgacagcgcgctgggccgagttcgtcgacgacggcctcacggattac
gactccggacgcaacgacccggcgggcgacagcacgagccggatgtcggcgtacctgaag
tacggcaacatccatccccgtactctcgctgccgatctgggcaaccagaaggggaaggga
gcgcaggcatacctgcgggagctcgcgttccgcgacttctacgccgatgtgctctatcac
tggccacacagcctgtggcacaactggaatcgtcagttcgacggcatcgacctcgacacc
gacgacaaggcgtacgagcgcttcgacgcctggaaggccgggcggaccggctttccgctc
gtcgatgccgggatgcgtcagctcgcggagaccggatacatgcacaaccgggtgcgcatg
gtcaccgcgtccttcctcgtcaaggatctgcacctgccgtggtggtggggagccgagtgg
ttcctcgagcagctggtagacggtgacatggcgtcgaacaatcacggctggcagtgggcg
gcgggcacgggaaccgatgcggcgccgtacttccgggtcttcaaccccgaggcgcaggcg
aagaagttcgatcccgacggcgagtacgtccggcggtgggtgggtgacatcgacgccgac
gattatcccgagccgatggtcgatcacaaggccgagcgtgaggaagcgctccgtcggttc
ggccagatctag
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