Gordonia sp. KTR9: KTR9_1837
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Entry
KTR9_1837 CDS
T02216
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
gor
Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_1837
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KTR9_1837
Archaeal homologous recombinant proteins
KTR9_1837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA_15
AAA_22
Calici_MSP
Asp_DH_C
DUF3037
Motif
Other DBs
NCBI-ProteinID:
AFR48476
UniProt:
J9S1A4
LinkDB
All DBs
Position
2079711..2082692
Genome browser
AA seq
993 aa
AA seq
DB search
MRLHRLRVRAFGPFAEEITVDFDDLGGDGLFLLHGQTGAGKTTVLDAVAFALFGRVPGVR
DVNRRLHSDHAAADEVPEVELEATIASRRLRITRSPEHERPKKRGDGTRRVNARATLTWV
DGSGPDLTRIPEIGDAVVRLLGMSADQFFQVVLLPQGDFARFLRAHSDEREALLERLFDT
ERFGDLEEWLRERSRESAATLTDQTAVLDRIAGQIVAVGGAEPIAEPDFDWAQECLERAR
VAAERTLVESGAAQAAADQAQAAYEGGSRVAELRRRGHAATERLARLAEGEQALADAGRA
RRLALRAAPIVPLADDSDRAVRDLTAAEQAVADARAELGRLPEGEILCAVDTGEDLDALL
DAAIDRWTEESGRWEPLTERVAQRPALVTEIDALDATISDAERRVAQTRESLEAAPGRRA
EAAGALRAAEDLRLQAPKLRAERDGLRRVRDALTDRDEVLVRLVAAEKDLLDARDAHAAA
RERVLDARERRLAGMAVELAGELVDGEACVVCGSVAHPRPATAAGPVETVADEEEAAEAE
ERASAMKAIAQSAVAALGERRVHLDAVIGGADPEAVDADLARVSADLAAAERAASRVPAL
QKAVDRVDAEIDAWRTTIADTESAQSARRERLNSLRQNLTELDSAVREATGGRGGVAERR
RELAELVRRTRRLRDARQEAARARDRVAGATARLSAACLDAGFDDVAAVRAAFAPDTQIA
AWDTMLQEASSLRAAAEETLADDDVRAAMSAPEPDLERLTVEREAARRRLETAAKEHAVT
ARQVTGLEEYVTQFWAALDALAPMQERHAELQGLAELVSGRGQNSRRMSLRSYVLAARLD
EVLVAASGRLREMSSGRYEFVHTDAAGVRGRRGGLGIEVRDEYTGALRATTTLSGGETFF
ASLALALGLADVVSAESGGRVLDTIFIDEGFGTLDPEALDLVMGVLDDLRTGGRVVGVVS
HVDELRARIPAQLHVLRGEHGSSVRVQSPLGVS
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcaccgcttgcgcgtccgtgcgttcggtccgttcgccgaggagatcaccgtc
gacttcgacgacctcggcggtgacggactgttcctgttgcacggacagaccggcgcgggt
aagaccacggtcctcgatgctgtcgccttcgcgctgttcgggagggtcccgggcgtgcgc
gacgtcaaccggcgactgcattcggatcacgcagcggccgacgaggtcccggaggtcgag
ctggaggcgacgattgcgtcccggcggctccggatcacgcgctcgcccgagcacgagcga
cccaagaagcgcggggacggcacccgcagggtgaacgctcgggcgacgctgacgtgggtc
gacgggtcggggcccgacctgacccgtatccccgagatcggtgacgcggtggtacggctg
ctgggcatgagtgccgaccagttcttccaggtcgtgctgctgccccagggcgacttcgcg
cggtttctgcgggcgcactccgacgagcgggaagcgttgctggagaggctgttcgacacc
gaacgattcggtgacctggaggagtggctgcgcgaacggtctcgggagagcgcggccacg
ctgaccgatcagaccgcggtgctcgaccggatcgccggccagatcgtcgcggtcggcggt
gccgagccgatcgccgagcccgacttcgactgggcgcaggaatgtcttgagcgtgcgcgg
gtggccgcggaacgcaccctcgtcgaatcgggtgcggcgcaggccgcggcagaccaggcc
caggccgcgtacgagggcgggagccgggtcgccgagctgcgacgccgggggcatgcggcc
accgagcgcctcgcccggcttgccgagggtgagcaggcgcttgcggacgcgggccgggca
cgccgcctcgctctgcgggccgcaccgatcgttccgctcgccgacgactccgatcgtgcg
gtgcgcgatctgacggccgcagagcaggccgttgcggatgcccgcgccgaactgggccgg
ttgccggagggcgagatcctgtgtgccgtcgacacgggcgaggacctcgacgcgctcctg
gatgcggccattgaccgctggaccgaggaatcggggcgctgggaaccgcttaccgaacgg
gtcgcgcagcggcctgcgctggtcaccgagatcgatgcactcgatgccaccatctccgac
gccgaacgccgggtcgcgcagacacgggagtcgctcgaggccgcgccgggtcggcgtgcc
gaggccgccggcgcgctgcgggcggccgaggaccttcgcctgcaggccccgaagctgcgg
gccgagcgtgacggactccgccgtgtccgcgacgccctgaccgaccgggacgaggtgctg
gtccggctcgtcgccgccgagaaggacctgctcgacgcccgcgatgctcatgccgccgcc
cgtgagcgggtgctcgacgcgcgggagcgtcgcctcgccgggatggcggtggagctggcc
ggcgaactcgtcgacggtgaggcgtgcgtcgtgtgcggttcggtcgcacacccgcggccc
gccaccgccgcgggccccgtcgagacggtcgccgatgaagaagaggcggccgaagccgaa
gagcgtgcgagtgcgatgaaggccatcgcccaatccgcggtcgccgcactcggcgagcgt
cgcgtgcatctcgacgccgtcatcggcggcgccgaccccgaggccgtcgacgccgacctg
gcccgggtgagcgccgatctagcggccgccgagcgtgccgcgtcacgagtgcctgcactg
cagaaggccgtcgatcgggtcgacgccgagatcgacgcatggcgcaccaccatcgccgac
accgagtcggcccagtccgcccggcgcgagcgcctgaactcgttgcggcagaacctcacc
gagctcgattccgcggttcgcgaagcgaccggcgggcgcggaggcgtcgccgagcgccgc
cgcgaactcgccgaactggttcgccgtacacgtcgtctccgcgacgcccggcaggaggcc
gcgcgtgcgcgggaccgggtcgccggagcaacggcccggctgtccgcggcctgcctcgat
gccggtttcgacgatgtcgccgcggttcgcgcggcgttcgccccggacacccagatcgcg
gcgtgggacacgatgttgcaggaggcgtcgagtctgcgcgccgcggcggaggagaccctc
gccgacgacgacgtgcgggccgcgatgtcggcccccgagccggatctcgaacggctgacc
gtggagcgtgaggccgctcgccggcgcctcgagaccgcggcgaaggaacacgccgtcacc
gctcgacaggtcaccggtctggaggagtacgtcacccagttctgggcggctctcgacgcg
ctggcgccgatgcaggaacgccacgccgaactccagggattagccgaactggtcagcggg
cgcggacagaattcgcggcggatgtcgctgcggtcgtatgtgctggccgcacgcctcgac
gaggtcctcgtcgccgcgtccggtcggctccgtgagatgtcctcgggtcgttacgagttc
gtccacaccgacgcggctggtgtccggggccggcgcggtggcctgggcatcgaggtgcgc
gacgagtacaccggcgcgctccgcgcgacgacgacgttgtcgggcggggagacgttcttc
gcgtcgctggctctcgcgctcggactcgccgacgtcgtctccgcggagtcgggcggacgg
gtgctcgacaccatcttcatcgacgaggggttcggcaccctcgatcccgaggcgctcgac
ctcgtgatgggcgtcctggacgatctgcggaccggtgggcgcgtcgtcggcgtcgtgagc
cacgtcgacgaactgcgggcgcgaatcccggcccagctgcacgtcttgcgcggcgagcac
gggtcgtcggtgcgcgtgcagagccccctcggcgtgtcgtga
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