Gordonia sp. KTR9: KTR9_1937
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Entry
KTR9_1937 CDS
T02216
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gor
Gordonia sp. KTR9
Pathway
gor03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KTR9_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gor03019
]
KTR9_1937
03009 Ribosome biogenesis [BR:
gor03009
]
KTR9_1937
Messenger RNA biogenesis [BR:
gor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KTR9_1937
Ribosome biogenesis [BR:
gor03009
]
Eukaryotic type
Pre-60S particles
RNases
KTR9_1937
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFR48576
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All DBs
Position
complement(2204184..2204768)
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AA seq
194 aa
AA seq
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MWIDCEMTGLRLESDKLIEIAALVTDSDLNILGDGVDVVIHADDAALASMPDVVTKMHAA
SGLTEEVRASTVTLAEAEKLVLDYIREHVTTAGAVPLAGNSIATDRGFITRDMPELDAYL
HYRMVDVSSIKELCRRWYPKVYFGQPEKGLAHRALADIRESIRELRYYRAAAFVPAPGPD
TDALAEIVKDLGPA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgactgcgagatgaccggactccgactcgagtcggacaaactcatcgagatc
gcggccctcgtgaccgacagcgacctcaacatcctcggcgacggtgtggacgtcgtgatc
cacgccgacgatgccgccctggcctcgatgccggacgtcgtgaccaagatgcacgcggcg
tcgggtctcaccgaggaggtgcgggcgtccacggtcaccctcgccgaggccgagaagctg
gtcctggactacatccgcgagcacgtgaccaccgccggagcggtgccgcttgccggtaac
tcgatcgccaccgaccgcggcttcatcacccgggacatgcccgaactcgacgcctacctg
cactaccgcatggtcgacgtcagctcgatcaaggaactgtgccgacgctggtatccgaag
gtctacttcggtcagccggagaagggcctcgcgcaccgggcgctcgccgacatccgcgag
tcgatccgcgagctgcgctactaccgcgcggcggcgttcgtacccgctcccggcccggac
accgatgccctcgccgagatcgtcaaggacctcggccccgcgtga
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