KEGG   Gordonia sp. KTR9: KTR9_2012
Entry
KTR9_2012         CDS       T02216                                 
Name
(GenBank) Signal recognition particle GTPase
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gor  Gordonia sp. KTR9
Pathway
gor02024  Quorum sensing
gor03060  Protein export
gor03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    KTR9_2012
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    KTR9_2012
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KTR9_2012
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gor02044]
    KTR9_2012
Enzymes [BR:gor01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     KTR9_2012
Secretion system [BR:gor02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   KTR9_2012
  Eukaryotic Sec-SRP protein
   KTR9_2012
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 cobW CbiA AAA_24 MeaB ArsA_ATPase APS_kinase AAA_31 TctA nSTAND3 Zeta_toxin CLP1_P NPHP3_N AAA_18 AAA_33 AAA_16 Thymidylate_kin TsaE MobB 6PF2K ATP_bind_1 AAA_30
Other DBs
NCBI-ProteinID: AFR48649
UniProt: J9SDR1
LinkDB
Position
2297381..2298943
AA seq 520 aa
MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLAVVRSFIARIKERAK
GAEVSGALNPAQTVVKIVNEELVGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL
GNWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTSVGGEGTLGVTAGDP
VSVAQAGVDEARSKHYDVVVIDTAGRLGIDAELMKQASDIRDATSPDEVLFVVDAMIGQD
AVTTAEAFADGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD
RMASRILGMGDVLSLIEQAEQHWDAQQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN
ILGMLPGAGQMKDVLSQVDDKQLDRVQAIIRGMTPAERDNPKIISASRRIRIANGSGVTV
SEVNQLVDRFFEARKMMAQMSGRMGMGGMNRKSNRKKGKGKKGKGRGPTPPKVRGGFPGM
PGGMPAGFPDLSNMPAGLDQLPPGLEGLDVSQFQQPKKKK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgttcgattccctctccgaccggttgaccggtgccctgaaggatctgcgtggcaagggg
cggctgtccgacgcggacatcgaccgcacctgccgcgagatccggctcgcgctgctcgag
gcggacgtctcgctcgcggtggtccggtccttcatcgcccggatcaaggagcgcgccaag
ggtgcggaggtctccggggcgctgaatccggcgcagacggtcgtcaagatcgtcaacgag
gaactcgtcggcattctcggcggcgagacccggcgagtgcggttcgccaagaacccgccg
accgtcatcatgctggccggactccagggcgccggtaagacgacgctcgccggaaagctg
ggcaactggctcaagcagcaggggcacacgccgctgctcgtcgcctgtgacctgcagcgg
ccgggcgcggtctcgcagctgcagatcgtcggtgaacgcgccggtgtgccggtgttcgcg
ccgcatccgggcacgagcgtgggcggtgagggcacgctcggcgtgaccgcgggcgatccg
gtctcggtcgcgcaggccggtgtggacgaggcacgcagcaaacactacgacgtcgtggtc
atcgacaccgccggccgtctgggcatcgacgccgagctgatgaagcaggcgtccgacatt
cgcgacgcgacctcgcccgacgaggtgctgttcgtcgtcgacgcgatgatcggccaggac
gcggtgaccaccgccgaggccttcgccgacggcgtgggtttcaccggcgtcgtgctgacc
aagctcgacggtgatgcgcgcggtggtgcggcgctgtcggtgcgcgaggtgaccggccag
ccgatcatgttcgcgtcatcgggcgagaagctcgaggacttcgacgtcttccatcccgac
cgcatggccagccgcatcctcgggatgggcgacgtgctgtcgctcatcgagcaggccgaa
caacactgggatgcgcagcaggccgaagcggcggccgccaagatcacgcagggcgagctg
accctcgaggacttcctcgagcagatgctgatgatccgcaagatgggcccgatcggcaac
atcctgggcatgctgcccggcgccggccagatgaaggacgtgctgtcgcaggtcgacgac
aaacaactcgaccgggtccaggcgatcatccgcggcatgactcccgccgaacgcgacaac
ccgaagatcatcagtgcctcgcgccgcatccgtatcgccaacgggtccggtgtgacggtg
agcgaggtcaatcagctcgtggaccggttcttcgaggcccggaagatgatggcgcagatg
tcgggtcggatgggcatgggcgggatgaaccgcaagtccaaccgcaagaagggcaagggc
aagaagggcaagggccgcggccccacgccgccgaaggtgcgcggcggtttcccgggcatg
cccgggggcatgccggccgggttcccggacctgtcgaacatgccggccggcctcgatcag
ctgccgccggggctcgagggtctcgacgtgtcgcagttccagcagcccaaaaagaagaag
tga

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