Gordonia sp. KTR9: KTR9_2659
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Entry
KTR9_2659 CDS
T02216
Name
(GenBank) G:T/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
gor
Gordonia sp. KTR9
Pathway
gor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KTR9_2659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_2659
Enzymes [BR:
gor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
KTR9_2659
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KTR9_2659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFR49296
UniProt:
J9S534
LinkDB
All DBs
Position
complement(3039238..3039849)
Genome browser
AA seq
203 aa
AA seq
DB search
MLLMGFSRAELLGYQDRTVDDLVGEGCKLLFVGINPGLWTAATGAHFARPGNRFYPALAK
AGIVGHVIDASRGMSDADRALLLDRGVGITNVVPRATATAAELYVDELREGGRRLRERVR
MIGPRVVAVAGITAYRSAFGRRDAVPGRQDETWDVGTGDGAELWVVPNPSGLNAHETVDS
LAAAYRRAAVAAGVVEDLRSPRS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtgctcctgatgggattcagccgtgccgaactcctcggctatcaggaccgcaccgtcgac
gatctggtcggcgaagggtgcaagctgctgttcgtcgggatcaatccgggtctctggacg
gcggccaccggagcgcatttcgcgcgtccgggcaatcggttctacccggcgctcgccaag
gccggcatcgttggccacgtcatcgacgcctcacgcggtatgtccgacgccgaccgcgcg
ctgctgctcgaccgcggtgtgggaatcacgaatgtcgtgccgcgtgccaccgcgaccgcc
gccgaactgtacgtcgacgaactccgcgagggcggacgccggctgcgcgagcgggttcgg
atgatcggcccgcgggtcgtcgccgtcgccggtatcaccgcctatcgcagcgcgttcggg
cgccgcgacgccgtgccgggacggcaggacgagacgtgggatgtgggcacaggggacggt
gccgaactgtgggtggttccgaaccccagcgggctgaacgcccacgagaccgtggactcc
ctcgccgccgcctaccgtcgggccgcggtcgccgccggggtggtggaggacctcagaagt
cctcggagctga
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