Gordonia sp. KTR9: KTR9_3238
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Entry
KTR9_3238 CDS
T02216
Name
(GenBank) RecG-like helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
gor
Gordonia sp. KTR9
Pathway
gor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KTR9_3238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_3238
Enzymes [BR:
gor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KTR9_3238
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KTR9_3238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
tRNA_anti-codon
RecG_wedge
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AFR49873
UniProt:
J9SMX3
LinkDB
All DBs
Position
complement(3722654..3724888)
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AA seq
744 aa
AA seq
DB search
MLSDSLADVLGVKPAEQLATVGVHTVGELLRYTPRRYIRRGHVADHERPEPGEWLTIVGR
ITKSDLIKMRSRKGSFLKVKITDDNDVYEASFFNPYRIKGLLRPGARVMMAGAVKYFRDQ
IQLSHPEWMILPDGDPEIEDVVGSKMLTEMYAIEEQVTGEHGDHPLITMFDRDILPMYPA
NKNIQTWDILGAVRRVLSESAPIPDALTESERRARGLVSTDEAIRKIHLPESEDDVKIAS
HRLKFDEALAIQTVLAQRRLAGRNESAPPCPRVPGGLEDKLRDRLPFTLTDGQVEVGEEL
AEDLARAQPMSRLLQGEVGSGKTLVSLLAMLRVVDNGFQCAILAPTEVLAAQHHRTMRTM
LGDLAEAGELTAAEGATRIALLTGSMKTKGRRETLLDVVTGQAGIVIGTHALLEDKVEFF
DLGLVVIDEQHRFGVEQRDVLRGKGRNGRIPHFLVMTATPIPRTVAMTAFGDLDTSVLRE
LPRGRQPITTSVVPTSRASWVDRVWSRANEEIAEGRQVYVVCSRIGDGPEPEPDGDEEKG
PKTTSVLEQYEALVSGPFAHRRVELLHGRLPADEKNAVMDAFGRGEIDVLVSTTVIEVGV
DVPNATTMVIVDADRFGVSQLHQLRGRVGRGRHAGLCLLMTNARDTSPSMDRLRAVAGSN
DGFELARVDLEQRREGDLLGSLQSGVNTSLRFLSLLEDVEVIEDARELAEDVVSEDITLL
EHRPLADLVDGILVPHKIAYLDKS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggattcgctggccgacgtgctgggggtcaagcccgccgaacaactcgccacc
gtcggagtgcacacggtcggcgaactgctgcggtacacgccgcgccgatacatacgacgc
ggccacgtggccgaccacgaacgtcccgagcccggcgagtggctgacgatcgtcgggcgg
atcaccaagtccgatctcatcaagatgaggagccgcaagggatcgttcctcaaggtgaag
atcaccgacgacaacgacgtctacgaggccagcttcttcaacccctaccggatcaaggga
ctgctgcgtcccggtgcgcgggtgatgatggccggcgcggtcaagtacttccgcgaccag
atccagttgtcccatccggaatggatgatccttcccgacggcgacccggagatcgaggac
gtcgtcggttccaagatgctgaccgagatgtacgcgatcgaggagcaggtcaccggagag
cacggtgaccatccgctgatcacgatgttcgaccgggacatcctgccgatgtacccggcc
aacaagaacattcagacctgggacatcctcggtgcggtccggcgggtgctgagcgagagt
gcgccgatccccgatgcgctcaccgagtccgaacgacgggcgcgggggcttgtgagcacc
gacgaggcgatccgcaagatccatctgcccgagtccgaggacgacgtgaagatcgcgtcc
catcggctgaagttcgacgaggcgctggccatccagaccgtgctcgcccagcgtcggctg
gcgggacggaatgagtcggcgccaccgtgtccgcgtgtccccggcggtctcgaggacaag
ttgcgtgaccgactcccgttcacgctgaccgatggtcaggtcgaggtgggggaggagctc
gccgaggatctcgcccgcgcgcagccgatgtcccgattgctgcagggtgaggtcggctcc
ggcaagaccctcgtgtcgttgctcgcgatgctccgggtggtcgacaacggatttcagtgc
gcgatcctggcgccgacggaagttcttgccgctcagcatcatcggacgatgaggacgatg
ctgggcgacctcgccgaggcgggtgagctgaccgccgccgaaggtgcgacgcgaatcgcg
ctgctgacgggttcgatgaagaccaagggccggcgcgaaacgctgctcgacgtggtcacc
gggcaggcggggatcgtgatcgggacgcatgcgctcctcgaggacaaggtggagttcttc
gacctcggcctcgtcgtgatcgacgaacagcaccgattcggtgtggagcagcgagacgtc
ctgcgcggcaaggggcgcaacggacgcattccgcatttcctcgtgatgaccgcgacgccc
atcccgcgaaccgtcgccatgacagccttcggcgacctggacacctcggtactccgggaa
ctaccgcgcggccgtcagccgatcaccacctccgtggtgcccacgagcagagcctcgtgg
gtcgaccgggtctggtcgcgcgccaatgaggagatcgcggagggtcgccaggtctacgtc
gtctgttcgcgcatcggcgacggtcccgaacccgaaccggacggggacgaggagaagggc
ccgaagacgacgtcggtgctcgagcagtacgaggccctcgtctccggaccgttcgcacac
cggcgggtggaactcttgcacggccggttgcccgccgacgagaagaacgccgtcatggac
gcgttcggccggggcgagatcgacgtcctggtgtcgacgaccgtcatcgaagtgggtgtc
gacgtacccaatgcgaccacgatggtcatcgtcgacgccgatcgcttcggcgtgagccag
ctgcaccagttacgcggtcgcgtggggcgcggtcggcatgccggactgtgcctgctgatg
acgaacgcccgggacacgtctccgtcgatggaccgcctgcgtgccgtcgcgggatcgaac
gacggattcgaactcgcgcgagtcgatctcgaacagcggcgggagggcgatctgctcggg
tcgctgcagtcgggcgtgaacacctcgttgcggttcctctcgctgctcgaggacgtcgag
gtcatcgaagatgcgcgcgaactcgcggaagacgttgtgagcgaggacatcacgttgctc
gagcatcggcctctcgccgacctcgtcgacggcatcctcgtcccgcacaagatcgcgtac
ctcgacaagtcctga
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