Gordonia sp. KTR9: KTR9_3326
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Entry
KTR9_3326 CDS
T02216
Name
(GenBank) Superfamily II DNA/RNA helicase, SNF2 family
Organism
gor
Gordonia sp. KTR9
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AFR49961
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Position
3816727..3819729
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AA seq
1000 aa
AA seq
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MPYDSPSSGRTPPDSAPKPHRAATLHALWRPGVGMAVWIDGDLSDLPSSLRDVLDGRRFR
SEIPVVDADGRRRFVPAATLGMTSGVTLLDSSRAVAVTGDVRWYRYLLDGVRSFVRSGTV
VPSVLQVAGEWMVRWVVIATPTWRSWHAVVVGSAPDALLHNGSAPALDDFLAELVDHECR
SAIARSALRLGEPRPASPIVRALLPDADPRPPSSPERLAAAAGGWSRWNSGAPRDDRSLI
FRLHEPEYDDLAENQWDDAWDDDSVPEPSRAEVAESSRWRLQVCRRSIDGQVEPVAPHRL
DAHEIDELTTELATAVREFPDLGRADPDRGSLDFLLPTEVAEELFATGAAALGAVGIPVL
LPRTIAEVRPSLTLRALAPPGGGAPAAMVGLREIQEFEWRLALGDTSDAITLTDADLDEL
SGQKGDLVRVRGVWMRAEGAALTRAAAFVAAQRALAATEPPSDFGELFNLVTGESDRLPV
PVSRVEGLSWLDDIADSGALRPESITPPADLAATLRPYQQRGLDWLAHLSALGVGGVLAD
DMGLGKTLQVIALECHERTGSTGSSDADPTKPTLVVCPMSLVGNWAREFARFAPTLRVAI
HHGPSRESGAAFAGIRDSVDVVVTTFAIAARDHELLSSRPWHRIVVDEAQHLKNVNTIAA
KAVRTVPADHRLALTGTPVENRLEDLRAVIDLVNPGLLGSASVFRARYAEPIERDRDPSA
LRRLSAITRPFILRREKSDPAIAADLPAKADFAVRANLTVEQAALYRAVIDELMAALRDK
QQRTLRRRNVLAALTRLKQVCNHPAHYLADGTDLVRDGEHRSGKVELLADIVSTVADEGD
RALVFTQFAAFGDMLSSWLSSEFGTEIPLLHGGLGRTERDRLVADFQSDDGPPVLLATLK
AGGTGLNLTAANNVIHVDRWWNPAVEDQATDRAYRIGQEQKVSVHRFVCVGTIEERIDDM
IAKKRELSRLTVAAGENWVSDLADDELFELFRLREEAVSE
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgactccccatccagcgggcggactcccccggactccgccccgaagcctcat
cgcgccgcgaccctccacgccctctggcggccgggcgtcggcatggcggtgtggatcgac
ggcgatctgtccgacctgccatcgtcgctgcgcgacgttctcgacggccggcggttccgc
agcgagatccccgtcgtcgacgccgacggtcgccggcggttcgtccccgccgcgacgctg
ggcatgacgtcgggggtcacgctgctcgactcgtcgcgtgcggtcgcggtgaccggcgac
gtccggtggtaccgctatctcctcgacggcgtgcggtcgttcgtgcggtccggcacggtg
gtgccgtcggtgctgcaggtcgcaggggaatggatggtccgctgggtcgtcatcgcgacc
ccgacgtggcgcagctggcatgcggtcgtcgtgggaagcgcgccggacgcattgctgcac
aacggttccgcaccggccctcgacgacttcctcgccgaactcgtcgaccacgaatgccgt
tctgccatcgctcgttccgcacttcgtctcggcgaaccccgacccgcgtcgccgatcgtt
cgggcccttctccccgacgcggacccccgtccgcccagctcgcccgaacgccttgcggcc
gccgcgggcggctggtcgaggtggaactccggcgccccacgagacgaccggtcgctgatc
ttccgtctgcacgagccggagtacgacgatctcgccgagaaccagtgggacgacgcgtgg
gacgacgactccgtccccgagccgagccgagccgaggtcgccgagagctcgcggtggcga
ctgcaggtctgccgtcggagcatcgacggacaggtcgaacccgtcgcaccgcaccggctc
gacgcccacgaaatcgacgagctgacaaccgaactggcgacggccgtccgtgagttcccg
gatctcggccgggccgatcccgaccgcggctcgctcgacttcctgctgccgaccgaggtc
gccgaagaactattcgccaccggcgcggcggcactgggggcggtcggcatcccggttctg
ctcccccggaccatcgccgaggtccgtccgagcctgaccctgcgtgcgctcgcgccgccc
ggcggcggggcgccggcggcgatggtcggtctgcgggagatccaggagttcgagtggcgc
ctcgccctgggcgacacatccgacgcgatcacgctcaccgacgccgatctggacgagctg
tccgggcagaagggcgacctggtccgggtgcgcggggtgtggatgcgcgccgagggtgcc
gcgctcacccgggcggccgcgttcgtcgccgcccagcgcgcactggccgcgaccgaacca
ccgagcgacttcggcgagctgttcaacctcgtcaccggcgaatcggatcggctgcccgtt
ccggtctcgcgcgtggagggcctctcgtggctcgacgacatcgccgacagcggcgccctc
cgtcccgaatccatcacgccgccggcggatctggccgccaccctgcgcccctatcagcag
cgcgggttggactggctcgcccatctgtcggcgctgggcgtcgggggcgtactcgccgac
gacatgggtctgggcaagaccctgcaggtcatcgccctcgaatgccacgagcggaccggt
tcgaccggctcgtccgacgccgaccccacgaagccgacgctcgtcgtctgcccgatgtcc
ctggtcggcaactgggcgcgggagttcgcgcgtttcgcgccgacgctgcgggtggcgatc
caccacggaccctcccgtgagtccggggccgccttcgccgggattcgcgactcggtcgac
gtcgttgtcaccaccttcgccatcgcggcacgcgaccacgagctgctgtcgtcccggccc
tggcatcggatcgtggtcgacgaggcccagcacctcaagaacgtgaacaccattgcggcc
aaggcagttcggacggtgccggccgatcaccgactcgccctcaccggcaccccggtcgag
aatcgactggaagacctccgcgcggtcatcgacctggtcaaccccggcctgctcggatcg
gcatcggtcttccgggcgcgctacgccgaaccgatcgaacgggaccgcgatccgtcggcg
ctccgacggctgtccgcgatcacccgccccttcatcctgcgccgcgagaagtccgatccg
gcgatcgccgcggacctcccggcgaaggccgacttcgccgtccgcgccaacctcaccgtc
gagcaggccgcgctctatcgcgcggtgatcgacgaactgatggcggcactccgggacaaa
cagcagcgcaccctgcgacgccgcaacgtgctggccgcactgacccgcctcaagcaggtg
tgcaaccaccccgcgcattatctcgccgacggcaccgacctcgtccgcgacggcgaacac
cgttccggcaaggtcgaactgctggccgacatcgtttccacggtcgccgacgagggcgac
cgcgctctggtcttcacccagttcgccgccttcggcgacatgctctcgtcgtggctgagt
tcggaattcggtaccgagatcccgctgctacacggcggtctgggccgcaccgagcgcgac
cgcctcgtcgccgacttccagtccgacgacgggccgccggtcctgctggcgaccttgaag
gccggcggcaccggactcaacctcaccgccgccaacaacgtcatccacgtcgaccgctgg
tggaacccggccgtcgaggaccaggccaccgaccgcgcctaccggatcggccaggagcag
aaggtgtcggtgcaccggttcgtctgtgtcggcaccatcgaggagcgtatcgacgacatg
atcgccaagaagcgcgaactctcccggctgacggtcgcggccggcgagaactgggtgtcc
gacctcgccgatgacgaactcttcgagctgttccggctgcgagaggaggccgtcagcgaa
tga
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