Gordonia sp. KTR9: KTR9_3524
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Entry
KTR9_3524 CDS
T02216
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gor
Gordonia sp. KTR9
Pathway
gor03420
Nucleotide excision repair
gor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KTR9_3524
03430 Mismatch repair
KTR9_3524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_3524
Enzymes [BR:
gor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KTR9_3524
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KTR9_3524
MMR (mismatch excision repair)
Other MMR factors
KTR9_3524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
DUF7553
Motif
Other DBs
NCBI-ProteinID:
AFR50159
UniProt:
J9SLJ5
LinkDB
All DBs
Position
complement(4021865..4024006)
Genome browser
AA seq
713 aa
AA seq
DB search
MPHPTSAANPESSPRASSPVSRGAVEGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRR
IAHLIDTGQVNPGQVLAVTFTARAAGEMRTRLRGLGVGGGSGGSVAAQTFHAAAMRQLRY
FWPRAFGDARWELLDNKFPLISRAARRSGLDTATDTLRDLSSEIEWAKASLISPENYVEA
VGRLGRESPAPPAKVAAVYGHYEDAKVSPDGDRLLDFDDMLIYMTQILTAEPGAADEFRS
RYRCFVVDEYQDVTPVQQGLLDAWLGERDDLTVVGDANQTIYTFTGASPNHLLDFSRRFP
EATVVRLERDYRSTPQVVDLANRVIGAARGRIAGTRLRLVGQRPAGPAPQFAEYDDEPAA
ATAVAIEIKHLIRAGVAPAEIAILYRVNAQSENYEQALTEAGIPYQVRGGEAFFARTEVR
QAMRQLATVAGREVRPDVEILDVVRAVLGELGLTAEEPSGTQARSRWESLKALVQLTEDM
VAENPGLTLPQLSAELAARAEARHPPTVQGVTLSSLHAAKGLEWDAVFLVGLTDGSLPIS
QAIKGSWEEVEEERRLFYVGVTRAREHLHLSWALARNEGGRARRRSRFLADLVPDDSPAS
PIAKERTPRRGPTCRVCGSRLMDSTATLLGRCAGCPSDLDEGLLVSLKEWRRERALEKKV
PAFVVFSDKTLTAIAEQRPTDTAALVAISGIGAKKVDEYGEDILDLVKTAGQK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcacccgacttctgctgcgaaccccgagtcctcgcctcgtgcctcgtcgccggtg
agtcgaggcgcggtcgaggggctcgaccccgaacagagtgccgcggtcctggcgccgcgc
ggaccggtgtgtgtgctggccggggcgggtacgggcaagacgcggaccatcacccgacgg
atcgcccacctcatcgacactgggcaggtcaatcccggtcaggtgctcgcggtcacgttc
accgcacgggcagccggggagatgcggacccggttgcgcggtctcggtgtcggcggcggt
tcggggggcagcgtcgcggcccagacctttcacgccgctgcgatgcgccagttgcggtat
ttctggccgcgggcgttcggcgacgcacgatgggagctcctcgacaacaagttcccgctc
atctcgcgcgcggcccggcgctccggtctcgacaccgccaccgacaccctgcgcgacctg
tcgtcggagatcgagtgggccaaggcctcgctgatctcaccggagaactatgtcgaggcc
gtcggccggctcggccgcgagtccccggcgccgccggcgaaggtcgctgccgtgtacggg
cactacgaggacgctaaggtctcacccgacggcgaccggttgctcgacttcgacgacatg
ctcatctacatgacgcagatcctcaccgccgaaccgggagcggcggacgagttccgttcg
cggtaccggtgtttcgtcgtcgacgagtatcaggacgtgaccccggtgcagcagggtctg
ctcgacgcctggctcggcgagcgcgacgatctgacggtcgtcggtgacgccaaccagacg
atctacaccttcaccggcgcgtcccccaaccatctgctggacttcagccgccggttcccc
gaggcgacggtcgtccgcctggagcgggactaccggtccactccccaggtcgtcgacctc
gcgaaccgggtcatcggtgcggcccgaggacggatcgcgggcacccggctccgcctcgtc
ggacaacgacccgccggcccggcaccgcagttcgccgagtacgacgacgagcccgccgcg
gcaacggctgtcgccatcgagatcaaacacctcatccgtgccggggtcgcgcccgcggag
atcgcgatcctgtaccgcgtcaacgcgcagtcggagaactacgagcaggcgctgaccgag
gcgggcatcccgtaccaggtccgcggcggcgaggcgttcttcgcgcgcacggaggtccgg
caggccatgcggcagctcgccacggtcgccggtcgcgaggtcaggcccgacgtggagatc
ctcgacgtcgtgcgagcagtcctcggcgaactcgggctcacggcggaagagccgtcgggt
actcaggcgcgcagccgctgggagtcgctgaaggcgctggtccaactgaccgaggacatg
gtggccgagaaccccgggctgacactgccgcagctgtcggcggagctcgcggcccgcgcc
gaggcgcgccatccgccgaccgtgcagggcgtgacgctgtcgtcgctgcatgcggccaag
ggactcgaatgggatgcggtgttcctcgtcggactcaccgacgggtcactgcccatcagt
caggcgatcaaggggtcgtgggaggaggtcgaggaggaacgccggctgttctacgtcggc
gtcacccgcgcccgcgagcacctgcacctgtcgtgggcgctcgcccgcaacgagggaggc
cgcgcccgccggcggtcacggttcctcgccgacctcgttcccgacgactcacccgcctcg
ccgatcgcgaaggagcgcacaccccgccgcggaccgacgtgccgggtctgcggttcacgg
ctgatggattcgaccgcgacactgctcggccggtgcgccggatgcccgtcggacctcgac
gaggggctgttggtctcgctcaaggagtggcgtcgcgagcgggccctggagaagaaggtt
ccggcgttcgtcgtcttctccgacaagacgctcaccgcgatcgccgagcagcggcccacc
gataccgctgcgctggtggcgatctcggggatcggggccaagaaggtcgacgagtacggc
gaggacatcctcgacctcgtcaaaactgcaggtcaaaaatag
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