Gordonia sp. KTR9: KTR9_3636
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Entry
KTR9_3636 CDS
T02216
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gor
Gordonia sp. KTR9
Pathway
gor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KTR9_3636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gor03021
]
KTR9_3636
03400 DNA repair and recombination proteins [BR:
gor03400
]
KTR9_3636
Enzymes [BR:
gor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KTR9_3636
Transcription machinery [BR:
gor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KTR9_3636
DNA repair and recombination proteins [BR:
gor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KTR9_3636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AFR50271
UniProt:
J9S8N5
LinkDB
All DBs
Position
complement(4142555..4143607)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEDVLAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVAGVKEDVTDIILNLKGLVVSSDEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSEDASFDADSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggatgtccttgccgagaaccgctcgaag
ttcgtcatcgagccgctcgagccgggcttcggctacaccctcggcaactcgctgcgtcgt
accctgctcagctcgatcccgggtgctgccatcaccagcatccgcatcgacggtgtgctc
cacgagttcaccaccgtggccggggtcaaggaagacgtcaccgacatcatcctgaacctc
aagggcctcgtggtcagctcggatgaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggagccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggctacgtgccggccgtgcagaacaaggcgtcgggtgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcgtctggtgctcgacgtggagaccaagaac
tcgatcagtgcgcgtgacgcgctggcatcggcgggcaagaccctggtcgagctgttcggg
ctcgcccgggagctcaacgtcgaggccgagggcatcgagatcgggccgtcgccggcggag
gccgaccacatcgcgtcgttcagcctgccgatcgaggatctcgagctgaccgttcgttcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggttgcccggaccgag
tcggatctgctcgacatccgcaacttcggccagaagtcgatcgacgaggtcaaggtcaag
ctgcacgcgctcggtctgtccctcaaggacagcccggccagcttcgatccgtcgcaggtc
gcgggttacgacccggccaccggcacgtggtcggaagacgcgtcgttcgacgccgattcc
ggtgaggatttcgcggagaccgagcagctgtag
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