Gordonia sp. KTR9: KTR9_4128
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Entry
KTR9_4128 CDS
T02216
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K03090
RNA polymerase sigma-B factor
Organism
gor
Gordonia sp. KTR9
Brite
KEGG Orthology (KO) [BR:
gor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gor03021
]
KTR9_4128
Transcription machinery [BR:
gor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTR9_4128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
Sigma70_ECF
HTH_IclR
DUF7343
MarR
GerE
HTH_24
HTH_Crp_2
HTH_3
YdaS_toxin
HTH_10
UPF0122
HTH_38
MarR_2
DUF134
HTH_26
VCPO_N
Motif
Other DBs
NCBI-ProteinID:
AFR50735
UniProt:
J9SGB0
LinkDB
All DBs
Position
complement(4749952..4750809)
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AA seq
285 aa
AA seq
DB search
MASGDRGDHDDYSDVLPSLRAMRDEVDDDRRTRLREDVIARCLPLADHVARRFSERGEPI
DDLRQVARIGLMHAVDRFDVERGNNFLAFAVPTVMGEVKRYFRDSTWSIRVPRRAQEASL
NIAKASEELLQSLGRSPRPSEIAKHLDLPVSEVIEGMVARSAYTASSIDAEAGSSTDGWT
LADTLGDEDARLELVEEFVTLQPALERLTDRERKILTLRFFKSMSQSEIAREVGISQMHV
SRLLTRIIETLRAEVVVEGPDGDDAQADVGRAATKVRGTPPGVTA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggtgaccggggcgatcacgacgactacagcgatgtcctaccgtctctccgc
gcgatgcgcgacgaggtggacgatgatcgccgaacccggctgcgggaagatgtcatcgcg
aggtgtctgccactggcagaccatgtcgccaggcgcttttccgaacgcggcgagcccatc
gacgatctgcgtcaggtggcgcggatcggtctcatgcacgctgtcgaccgtttcgacgtc
gagcgcggcaacaacttcctcgccttcgcggtgccgaccgtcatgggcgaggtgaagcgg
tacttccgcgacagcacctggtccatccgggtgcctcgccgggcgcaggaggcttctctc
aacatcgccaaggcgagtgaggagttgttgcagtcgctcggacggtctccgcgcccgagt
gagatcgccaaacacctcgacctaccggtcagtgaggtgatcgaggggatggtcgcgcgg
tcggcctacaccgccagctcgatcgatgccgaagcaggctcctcgaccgatggctggact
ctcgcggacactctgggtgacgaggacgcgcgattggaactcgtcgaggagttcgtcacg
ctacagccggcactcgagcggcttaccgaccgtgagcgcaagattctcaccctccgattc
ttcaagtcgatgtcgcaaagcgaaatcgctcgtgaggtggggatctcccagatgcatgtg
tcgcgattgctgacgcgcatcatcgagaccttgcgcgcagaggtcgtcgtcgagggtccg
gacggcgacgacgcgcaggccgatgtcgggcgtgccgccaccaaggtccgcggcacgcct
ccgggcgtcacggcttga
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