Gordonia sp. SMJS1: QAD21_00015
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Entry
QAD21_00015 CDS
T10225
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
gos Gordonia sp. SMJS1
Pathway
gos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QAD21_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_00015 (recF)
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QAD21_00015 (recF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_tran
AAA_29
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
WGJ85649
LinkDB
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Position
3376..4575
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AA seq
399 aa
AA seq
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MFVRELHLRDFRSWRSVDLDLAPGPTVFTGRNGFGKTNLLEALFYLSTLRSHRVSSDAPL
VHAGSASASVTATVENDGRELTAELRINAEGANKATINRSPARRPRDLLGILRTVLFAPE
DLSLVRGDPSDRRRFVDELVAQRGPRYAAARADYDRVLRQRSALLKTAAAALRRGGQQAD
SVVSTLDVWDGQLADLGGQVIAARLSVLAELEPHFTGSYASIAPHSRPAVLRYRPAGGVE
IEEHTPEAIADVLALRLTELRDKEIERGLCLVGPHRDDIDIVLGSDIAKGFASHGESWSL
ALALRLGSVELTRAEGVEPVIMLDDVFAELDAKRRAQLVDFTADAEQLLITAAVAEDIPG
RIGGRRIGVDVVDDDAGRRSHIVDEALDDVTAAGEEAHE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtccgtgagctgcatctgcgcgatttccgatcgtggcggtccgtcgacctcgat
ctggcacccgggccgacggtcttcactggccgcaacggcttcggcaagaccaatctgctc
gaggcgctgttctatctctcgacgctgcgctcacaccgggtgagttccgatgcaccgctc
gtacacgcgggctccgcgtcggcgtcggtcaccgcgacggttgagaacgacggccgtgag
ctgaccgccgagctgcggatcaatgccgagggcgccaacaaggcgaccatcaaccggagc
ccggcgcggcggccccgcgacctgctcggcatcctccgtacggtgctgttcgcgcccgag
gacctgtccctggtgcgtggtgacccgagcgaccgccgacgcttcgtcgacgaactggtc
gcccagcggggtccccgttacgccgccgcccgcgcggactacgaccgggtcctgcgtcag
cggtcggccttgctcaagactgccgccgcggcgctgagacgtggtgggcaacaggcagat
tcggtggtcagcacacttgatgtctgggatggtcagctcgcggatctcggcggtcaggtg
atcgccgcacggttgtcggtgctcgccgagctcgagccgcacttcaccggctcatacgcc
tcgatcgcgccgcattcacggccggccgtgctccggtatcgtcccgccggcggtgtcgag
atcgaggagcacacacccgaggcgatcgccgacgtgctggcactacgcctgacggagttg
cgcgacaaggagatcgagcggggcctgtgtctcgtcggtccgcatcgcgacgacatcgac
atcgtgctcggcagcgatatcgcgaaaggctttgcctcacacggggaatcctggtcgttg
gcactggctctgcgcctcggctccgtcgagctcacccgcgccgaaggtgtcgagccggtg
atcatgctcgatgacgtgttcgccgaactcgacgccaagcggcgcgcgcaactcgtcgat
ttcaccgccgacgccgagcaactcctcatcaccgccgccgtcgccgaggacatccccggg
cggattggtggccggcggatcggcgtcgatgtggtcgacgacgacgcgggccggcggtcg
cacatcgtcgacgaagcgctcgacgatgtgacggcagcgggggaggaagcccatgagtga
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