Gordonia sp. SMJS1: QAD21_00965
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Entry
QAD21_00965 CDS
T10225
Symbol
lysX
Name
(GenBank) bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
QAD21_00965 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gos01007
]
QAD21_00965 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gos03016
]
QAD21_00965 (lysX)
Enzymes [BR:
gos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
QAD21_00965 (lysX)
Amino acid related enzymes [BR:
gos01007
]
Aminoacyl-tRNA synthetase
Class II (A)
QAD21_00965 (lysX)
Transfer RNA biogenesis [BR:
gos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
QAD21_00965 (lysX)
Prokaryotic type
Other AARSs
QAD21_00965 (lysX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
MASE3
Motif
Other DBs
NCBI-ProteinID:
WGJ85814
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All DBs
Position
204987..208400
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AA seq
1137 aa
AA seq
DB search
MATDTPLAPVDPENPGEHRDVGPRTPTAADRRSLALLDKIRRPSGFGSRAPHIAGTIVGV
LAAIALLSSLFPAIRHLIHDPRRYVDDYIITLPDTSFAWAFVLALIAVALSARKRIAWWI
SVIYLILFMATNAFYLVPSLADDLGVTRWDRTNIYLGLFIDALALMFLLSTYRQFYTRVR
KGAVLAAFGTLIAGLAIATLLGWALVWAFPHTLTRGDRLPYAFNRVVAFGAIDQDASFDG
RHTHLFVNGLLGLFGALALIAAAVVLFRSQRLRWLITAEDEALIRALITRFNDDDSLAYF
STRRDKAVVFSPDGRAAITYRVEVGVGLAGGDPIGDPESWPDAIAEFLTLCEKYGWHPAS
MGSSPRGAAAFDAAGFVSLNIGDEAILHTREFSLSGPAMKAVRQAVTRTRRAGVGVRIRR
HNEIGDTEMAKIVARADDWRDTDEERGFAMALSRIGDPADGDCLLVEAVMDEGTPDERVV
GMLSFVPWGRRGVSLDLMRRDRHGPNGVVETMVAELCRNSEQLGITQVSLNFAAFRAFFE
QGPQIGAGPVMRMGYSILMFGSRFFQMESLYKSNAKYLPDWQSRYLCFEDSRILPRVGLA
AIVTEGFITLPRFGRAKHYTQGPPSIPPGVNAPALIAELDAEAATPEGAVVHRPEQVRVR
LEKMDRLVERGFDPYPPADQPTHTIAAAKAEPEGTVVTVAGRVTRLRDFGKVVFADVHDW
SGEVQVLVEDSRIIPGTPDFGTDVDLGDLIQARGVVGTSRKGELSILIDAWRINGKCLRP
LPDKWAGLTDPEARVRQRYVDLAINEQTRASLATRSLVVKSLRDFLSARGYLEVETPILQ
QIHGGANATPFQTHINAYNLDLYLRIAPELYLKRLCVGGVEKVFEIGRNFRNEGVDFSHN
PEFTSLEAYEAHSDYLKMLDLTREMIQYAATAAYGEPVIVRTDADGNEERVDISGEWPVK
TVHQVVSEGAEQEITPETSVEELRAVCDRLEINHRPDWDAGQIVLELYEHLGEDRTTFPT
FYTDFPTSTSPLTRAHRSKPGVAERWDLVAWGVELGTAYTELTDPVEQRARLTEQSILAA
DGDPEAMELDEDFLQALEYAMPPTGGLGVGVDRVVMLITGQSIRESLAFPLAKPQDA
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgacacccccctcgcgccggtcgaccccgagaatcccggcgagcaccgcgac
gtgggaccgcggacgcccaccgcggccgaccgcaggtccctcgcgctgctcgacaagatc
cgacggccctccgggttcgggtcccgagccccgcacatcgccggcacgatcgtcggtgtc
ctggcggcaatcgcgttgctgtccagcctcttcccggcgatccggcatctgatccacgac
ccccgccgctacgtcgacgactacatcatcaccctccccgacaccagcttcgcctgggcg
ttcgtgctcgccctcatcgccgtcgcgctctcggcccgcaagcggatcgcctggtggatc
agcgtcatctacctgatcctgttcatggcgaccaacgcgttctatctcgtgccgtcgctg
gccgacgacctgggcgtgacgcggtgggaccgcacgaacatctacctcggactgttcatc
gacgcgcttgccctgatgttcctgctgtcgacgtaccgtcagttctacacacgggtccgc
aaaggcgccgtcctggcggcgttcggcaccctgatcgccggactggcgatcgcgacgctg
ctgggctgggccttggtgtgggcgttcccgcacacgctgacccgaggcgaccggttgccg
tacgcgttcaaccgggtcgtggcgttcggcgccatcgaccaggatgcctcgttcgacggt
cggcacacccacctgttcgtcaacggcctgctgggactgttcggcgccctggcgctgatc
gccgcggccgtcgtgctgttccggtcgcaacggctgcgctggctcatcaccgccgaggac
gaggccctcatccgggcgctgatcacgcggttcaacgacgacgattcgctggcgtacttc
tcgacccgccgcgacaaggccgtcgtgttctcgcccgatggtcgggcagcgatcacctac
cgggtggaggtaggcgtcggactggcgggcggtgacccgatcggcgatccggagtcgtgg
ccggatgccatcgccgaattcctcaccctgtgcgagaagtacgggtggcacccggcgtca
atggggtcgagcccgcgcggcgcggccgccttcgacgccgccggtttcgtctcgctcaac
atcggcgacgaggccatcctgcacacgcgcgagttcagtctcagtgggccggccatgaag
gcggtgcgccaggccgtgacccggacccgtcgtgccggggtcggtgtccgtatccgacgg
cacaacgagatcggcgacaccgagatggcgaagatcgtcgcgcgcgccgacgactggcgc
gacaccgacgaggaacgcggcttcgcgatggcgctctcgcgcatcggcgatcccgcggac
ggcgactgcctcctggtcgaggccgtgatggacgagggcacccccgacgagcgggtcgtc
ggcatgctgtccttcgtgccgtgggggcgtcgtggtgtctcgctcgacctgatgcgtcgt
gaccggcacgggcccaacggcgtcgtggagacgatggtcgccgagttgtgccgtaactca
gagcaattgggcatcacccaggtgtcgctgaacttcgcggcgttccgggcgttcttcgag
cagggtccccagatcggggccgggccggtgatgcggatgggctactcgatcctcatgttc
ggctcgcggttcttccagatggagtcgctgtacaagtcgaatgcgaagtatctgccggac
tggcagtcgcgctacctgtgcttcgaggacagccggatcctgccccgggtgggcctcgcc
gcgatcgtgaccgagggtttcatcacgttgccgcgcttcggacgggccaagcactacacg
caggggccgccgtcgatcccgcccggtgtcaacgcgcccgcgctcatcgccgagctcgac
gccgaggcagccacacccgagggtgcggtcgtccaccggccggaacaggtgcgcgtccga
ctcgagaagatggaccggctcgtcgagcgcggcttcgatccgtacccgccggccgatcaa
cccactcatacgatcgcggcggccaaggccgaacccgagggaaccgtcgtcaccgtcgcc
ggacgcgtgacgcgacttcgggacttcggcaaagtggtgttcgccgacgtccacgactgg
tccggcgaggtgcaggtgctggtcgaggattcccggatcatcccaggcacacccgatttc
ggtaccgacgtcgacctcggggatctgatccaggcccgcggcgtcgtcggcacgagtcgg
aagggtgagctgtcgatcctgatcgacgcctggcggatcaacggcaaatgcctgcgtccg
ctacccgacaaatgggccggcctcaccgatccggaagcgcgtgtccgccagcgctatgtc
gacctggcgatcaacgagcagacgcgagcatcgctcgccacccgcagcctcgtcgtgaag
tcgttgcgcgacttcctctccgcgcgcggctacctggaggtggagacgccgatcctgcaa
cagatccacggcggcgcgaacgccaccccgttccagacgcacatcaacgcctacaacctc
gacctgtatctgcggatcgccccggagctctacctcaagcgactgtgtgtcggaggtgtc
gagaaggtcttcgagatcggccgcaacttccgcaacgagggtgtcgacttcagccacaac
cccgagttcacgagtctggaagcctatgaggcgcacagtgattacctcaagatgctcgac
ctgacgcgcgagatgatccagtacgcggcgacggcggcctacggggaaccggtcatcgtg
cgcaccgatgccgacggaaacgaagagcgcgtcgacatctccggggagtggccggtcaag
accgttcatcaggtggtctcggagggcgcggagcaggagatcacgccggagacctccgtc
gaggagttgcgcgcggtgtgtgaccgcctggaaatcaatcaccggcccgactgggacgcc
gggcagatcgtcctggaactgtacgagcacctcggcgaggatcgcaccaccttcccgacc
ttctacaccgacttcccgacgtcgacgtcgcccctcacgcgcgcacaccggagcaagccg
ggcgtcgccgagcggtgggacctcgtcgcctggggcgtcgaactcggtacggcttacacc
gaactcaccgatccggtggagcagcgggcacgcctcaccgaacagtcgatcctggctgcc
gacggtgatcccgaggccatggaactcgacgaggacttcctgcaggcactggaatacgcg
atgccgccgaccggaggtctgggtgtcggtgtcgaccgcgtggtcatgctcatcaccgga
cagtcgatccgcgagtcgctcgcgttcccgctggcgaaaccgcaggacgcttga
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