Gordonia sp. SMJS1: QAD21_01380
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Entry
QAD21_01380 CDS
T10225
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
gos Gordonia sp. SMJS1
Pathway
gos00074
Mycolic acid biosynthesis
gos01100
Metabolic pathways
gos01110
Biosynthesis of secondary metabolites
Module
gos_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
Lipid biosynthesis proteins [BR:
gos01004
]
Polyketide synthase
Modular PKS
QAD21_01380 (pks13)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGJ85892
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Position
296839..302169
Genome browser
AA seq
1776 aa
AA seq
DB search
MSELNTDEARSIDSAAAGTDGETAGDLTVDQLRDWLREWVSQATGLPVEQIAVDRPMEEL
GLSSRDAVALAADVEDKTGVILTATVVYNHPTIATLAQRIIEGDPDEGADGDADTFWRRE
RTADDDIAIVGLSTRFPKSGTTPESTWDALIAGVDGVSDLPADRWSEFRSDPRLVEILDA
ANTKGGYLDDVRTFDADFFQMSPREVEMVDPQQRLALELTWEALEHAHIPPSDLKGAPVG
VFIGSSTNDYQLLATLGLSEGAEDTAAYALTGTSTAIVANRVSYFYDFRGPSIALDTACS
SSLVAVHQAVRSLRTGESDLALAGGVNMIINPAATLGFDKIGAQAADGHVKAFSADADGF
IRAEGGGLFVLKRLSDARRDGDDVLAVIAGSAVNSDGRSNGLPAPNPEAQVDVLRDAYAD
AAIDPRTVDYVEAHGTGTILGDPIEADALGRVVGRGRLPGSPMLLGSVKTNYGHMESAAG
AGALAKVVLAMQHGTIPASLNYSGPNPYIQFDANNLKVIPEATEWPRYSGHAVAGVSGFG
FGGTNAHVVVREVRPEDLAPASAPAGHAGASELPASASLVDEPDLDDDVYLTEAERAVLA
AQAKNVDPVIEETASDPAAGFAPCAVEGSVVPLVISGFLPSRRRKTAADLLEWLESDEGR
STPLADIGRALAHRNHGRSRAVVMARTHDDAITGVRAVAEGKSNPLVYSSDSPDAASAVW
LLSGFGSQHRKMAKQLYTENPIFAKYVDRVDELVQNELGYSIAEMFVDDEQTYGIEQSQV
GIYTIQVALADTLRHHGAEPGVLVPHSMGEASAAYISGGLSLEDATRVICQRSRLMGEGE
SMLQGDDIRLMALVEYSAEDITDVLTDYPDLEICVYAAPTHTVIGGPESQVDAIVERAEK
EGKLGRKLATKGASHTSQMDPLLGELAYELTGITPLRPTTGFYSSVDREVFYRAGHEPVH
TIDYFTKGLRHSVWFSQAIAKSVENGHRTFLELSPNPAVLISVAAVTFSAGLHDAELIET
LRRKEDESYGLVNALMKLYVHGHPVDVASLFGRGGHAAIPRTRFERKEFWLTAKISSGGS
AGTVPGSHVALPDGRHAWEVNAAAVTDPRELVRAAAAQVLANAAVGASVAHSAIPASGTL
TTTLSPHPGGAAVTVHAKADKNFQLLFEAAVTGDLDDTAGEVTAAPAAPARSGAEVFADD
TVVVEDDVVDDIGNRWSPESGETVGDRLAIIVGESMGYDPEDLPREIPLIELGLDSLMAV
RIKNRVEYEFDIPQLQLQAMRQANLADVEKFVDFAVTHRDQLDDLAQNAAGGGELDTAAL
NAYIDEQNAGGGESAASAPAGQSDEPGEQSPEPKRHIAEDLADVEQAVANSPEPEVSSRE
EAVEESAAPAATPKPATDITSQRAVAEAAGSDVPPRDAAERLTFGTYAVVTKVSAGGIFN
KLPVLSEDVAQQLTDRLNERTGGDLDVEDILDSETIEEMSNYVREHLDAGASTDGFLRYL
RLVPDGKKVYDPSAGDPTPILLFHPAGGNTSAYEALLKRLPADRPVIGFDRGVEGSIEDR
VREYLPRLRELQPNGPYVLVGWSFGGALAYGVAQLLREAGAEVAFVGLIDVVRPRADMTE
TPDSKRARLERWKEFAIRNYDLDPDVPIPMDRLVEADDEGQFAIIMEMMSMSGTKIPGGI
IEHQRTSFIENRVLSSIAPEPYDGKVVLYRADKMHAGAVELEPQWAEIDEDGRWGEVVDD
LEIIHVGGDHLSIVDEPYIAKIGNDLAARVGRLDEQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgaataccgacgaggcccgcagtatcgattccgccgcggccggcaccgac
ggcgagaccgccggtgacctcactgtcgaccagcttcgtgattggctgcgcgagtgggtg
tcacaggcgaccgggctccccgtcgagcagatcgccgtcgaccgtcccatggaggagctc
ggtctctcgtctcgcgacgccgtggcgctcgccgccgacgtcgaggacaagaccggggtg
atcctcaccgcgacggtcgtctacaaccatccgacgatcgccacgctcgcgcagcgcatc
atcgagggcgatcccgacgagggcgccgacggcgatgcggacaccttctggcggcgcgag
cgcaccgcggacgacgacatcgcgatcgtcgggctctcgacccggttcccgaagtcgggc
acgacgcccgagtcgacgtgggacgcgctcatcgccggcgtcgacggtgtctcggacctg
cccgcggatcggtggtcggagttccggtccgatccccggctcgtcgagatcctcgacgcg
gccaacaccaagggcggttatctcgacgacgtccgcacgttcgacgccgacttcttccag
atgagtccgcgcgaggtcgagatggtcgacccgcagcagcgtctcgcgctcgagctgacc
tgggaggcactcgagcacgcgcacatcccgccgagcgatctcaagggtgcgccggtcggt
gtgttcatcggctcctccacgaacgactaccagctgctggcgaccctcggcctgagtgag
ggcgccgaggacaccgccgcgtatgcgctgaccggcacctccaccgcgatcgtcgcgaac
cgggtgtcctacttctacgacttccgcgggccgtcgatcgccctcgacacagcgtgctcg
tcgtcgctggtggccgttcatcaggccgtccgcagcctgcggaccggcgaatccgacctc
gcgctggccggcggcgtcaacatgatcatcaacccggcggccaccctcggtttcgacaag
atcggcgcccaggcggcggacggacacgtgaaggcgttctccgccgacgcggacggattc
atccgcgccgagggcggcggattgttcgtcctgaagcgactgtccgacgcgcgtcgtgac
ggcgacgacgtcctcgcggtcatcgcgggctcggcggtcaacagcgacggtcgctcgaac
ggcctgccggccccgaaccccgaggcgcaggtcgacgtcctgcgggacgcctatgccgac
gccgcgatcgatccgcgcaccgtcgactacgtggaggcccacggcaccgggaccatcctc
ggcgatccgatcgaggccgacgccctgggccgcgtggtcggtcgcggacgcctccccggc
tcgccgatgctgctcggatcggtcaagacgaactacggccacatggagtcggccgcgggc
gcgggtgctctggccaaggtcgtgctcgcgatgcagcacggcaccatcccggcgtcgctg
aactacagcggccccaacccgtacatccagttcgacgccaacaatctcaaggtcatcccg
gaggccaccgagtggccgcgctattccggtcatgccgtcgccggtgtctccggattcggt
ttcggcggcaccaacgcgcacgtcgtcgtccgcgaggtgcggcccgaggatctcgcgccg
gcgtccgcgcccgcaggccatgcgggcgcatccgagttgccggcgtcggcgtcgctcgtc
gacgaacccgatctcgacgacgacgtctacctgaccgaggccgagcgtgccgtgctcgcc
gcgcaggcgaagaacgtcgatccggtgatcgaagagaccgcgtcggatccggccgccggc
ttcgcaccgtgcgcggtcgagggttcggttgtgccgctggtcatctcgggcttcctgccg
tcgcgtcggcgcaagaccgccgcggacctgctcgagtggctcgagtccgacgagggacgg
tcgacgccgctcgccgacatcggccgcgcgctggcacaccgcaaccacggacgctcgcgc
gccgtcgtcatggcccgtacgcacgacgacgcgatcaccggcgtccgtgcggtggccgag
ggcaagagcaatccgcttgtctactcgtcggattcgcccgatgccgcgtccgcggtctgg
ctgctctccggattcggttcgcagcaccgcaagatggccaagcagctctacaccgagaac
ccgatcttcgccaagtacgtcgaccgggtcgacgagctggtgcagaacgagctcgggtac
tcgatcgcggagatgttcgtcgacgacgagcagacctacggcatcgagcagagccaggtc
ggcatctacacgatccaggtcgcgctcgccgacaccctgcggcaccacggcgccgaaccc
ggtgtgctcgtgccgcattcgatgggcgaggcctcggccgcgtacatcagcggcggcctc
tcgctggaggacgcgacccgggtgatctgccagcgctcgcgcctgatgggcgagggcgag
tcgatgctccagggcgacgacatccgcctgatggcgctcgtcgagtacagcgccgaggac
atcaccgacgtcctcaccgactaccccgacctcgagatctgcgtctacgccgctccgacg
cacaccgtcatcggcggaccggagtcgcaggtcgacgccatcgtcgagcgtgccgagaag
gagggcaagctcggacgcaaactggctaccaagggtgcgagtcacacctcgcagatggac
cccctgctgggtgaactggcctacgagctcaccggtatcacgccgctgcggcccaccacc
gggttctacagctcggtcgaccgcgaggtcttctaccgcgccggccacgagcccgtccac
acgatcgactacttcaccaagggcctgcgccacagcgtgtggttcagccaggcgatcgcg
aagtcggtggagaacggccaccgcaccttcctggagctctcgccgaacccggccgtcctg
atctccgttgccgcggtgaccttctcggctgggctgcacgacgccgagctcatcgagacg
ctgcggcgtaaggaggacgagagctacggactcgtcaacgcgctgatgaagctctacgtg
cacggacatccggtcgacgtcgcgtcgctgttcggtcgcggtggtcacgcggccattccg
cgtacccgcttcgagcgcaaggagttctggctcaccgcgaagatctcctcgggcggctcg
gccggcacggtcccgggatcgcacgtggcactgcccgacggccgtcacgcctgggaggtc
aacgcggccgcggtcaccgatccgcgtgaactggtgcgtgccgcggcggcccaggtcctg
gcgaatgcggctgtcggggcgtcggtcgcgcacagcgccatcccggcatcgggaaccctc
acgacgacgctgagcccgcatcccggcggtgcggcggtgaccgtgcacgccaaggcggac
aagaactttcagctgctgttcgaggcggcggtgaccggtgacctcgacgacaccgcaggt
gaggtcacggccgcgccggcagctccggcacggtccggtgccgaggtgttcgccgatgac
acggtggtcgtcgaggacgacgtcgtcgacgacatcggcaaccgatggagtcccgaatcc
ggtgagacggtgggtgatcggctcgcgatcatcgtcggcgagtccatgggctacgacccc
gaggacctgccgcgcgagatcccgctgatcgagctcggtctcgactcgctgatggcggtg
cggatcaagaaccgcgtcgagtacgagttcgacatcccgcagctgcaactgcaggcgatg
cgccaggcgaacctcgccgacgtcgagaagttcgtcgacttcgcggtgacgcatcgcgat
cagcttgacgatctcgcccagaatgccgccggcggtggcgaactcgacaccgcggcgctc
aatgcctacatcgacgagcagaacgccggcggtggtgagtcggcagcctccgcaccggcc
ggtcagtccgacgagcccggcgagcagtcgccggagccgaagcggcacatcgccgaggat
ctggccgacgtcgagcaggcggtcgcgaactcgcccgaaccggaggtgtcgtcacgcgag
gaggcggtcgaggagtcggccgctcccgcggcaaccccgaagccggccaccgacatcacc
tcgcagcgggccgtcgccgaggcggccggctcggacgtgccgccgcgggatgccgccgag
cgcttgaccttcggcacgtacgcggtggtcaccaaggtctcggccggcggcatcttcaac
aagctgccggtgctgtcggaggacgtggcccagcagctcaccgatcgcctcaacgagcgc
accggcggggatctcgacgtcgaggacatcctcgactcggagacgatcgaggagatgtcg
aactacgtgcgcgagcatctcgatgccggcgcgtcgaccgacgggttcctgcgctacctg
cgcctcgtcccggacggcaagaaggtctatgacccgtccgccggcgatccgacgccgatc
ctgctgttccatcccgcgggcgggaacacctccgcctacgaggcgctgctgaagcgtctg
ccggcggaccggcccgtcatcggcttcgaccgtggagtcgagggatcgatcgaagaccgt
gtgcgcgaataccttccgcgcctgcgtgagctgcagccgaacggcccgtacgtgctggtc
ggctggtccttcggcggtgcgctcgcctatggcgtcgcgcaactcctgcgtgaggccggg
gcagaagttgccttcgtgggcctcatcgacgtggtgcgcccccgcgcggacatgacggag
acgccggacagcaagcgggcgcggctcgagcgctggaaggagttcgcgatccgcaactac
gacctcgaccccgatgttccgatcccgatggatcggctcgtcgaggccgacgacgagggg
cagttcgcgatcatcatggagatgatgtcgatgtcgggcaccaagatccccggcggcatc
atcgaacaccagcggacctcgttcatcgagaaccgcgtgctgagcagcatcgcgccggaa
ccctacgacggcaaggtcgtgctgtaccgggccgacaagatgcacgccggcgccgtcgaa
ctcgaaccgcagtgggccgagatcgacgaagacggccgctggggtgaggtcgtcgacgac
ctggagatcatccacgtcggcggtgaccacctctcgatcgtcgacgagccgtacatcgcc
aagatcggcaacgacctggccgcgcgggtcggacggctcgatgagcagtag
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