Gordonia sp. SMJS1: QAD21_01810
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Entry
QAD21_01810 CDS
T10225
Name
(GenBank) DEAD/DEAH box helicase
Organism
gos Gordonia sp. SMJS1
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
DEAD
SWIM
SWI2_SNF2
aBig_2
Motif
Other DBs
NCBI-ProteinID:
WGJ85964
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Position
406286..409663
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AA seq
1125 aa
AA seq
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MAAFDQLSPAESGLLAHFDVATIGRGAEYAQQGRVALEDWDPLFMSATGTCVGSSGDLYS
LEIGFGDDARGYAVDVAECDCPVGANCKHAVALALGVMRAGLLGASPRGVRHASAPWRTL
LGDLVAGATPKEPGSAPIGLLVELDDPEWMSLKTVTLRLVTPGKKGNWVRTGITWSSIEP
GHVTEYYRSTTDHPAEHFDPVHLARVRAVHLCAGDKHQYGTSQVHRLDQASAEIWTALRA
AVDDGVVLVAHKSTGAKKVELLPPASAALTVDRDDEGLVVSGGVDFPTVGPSADDALMLF
GSVPHGASLVRGGTMFLAPLVDDGTSKALRALLDAGTIGIPDTDIAEFADEVLPDLAGRM
SVTVADGAVTRPEITGPDAAVTLRVADDGGAHLEWGVVYRVNGSRRFFPSGQSSGFGDDV
AERRLWKQLRGHLEAAARVCDRWQIQVAGFPGSKFADDPELAEMSRDEALASASIALLTR
RYRYSPVDTARFVTEVAPELRADGIEVEIVGELPDYRAAEVVPEIGFGAERSDDNDWLGL
SITVEVDGVAVPLHQVLTALSNGATHMLLPDGAYFVLDTPELQRLAELVAEARALGELDR
GRVRRDTHNATLWDELLELGTVDDDLTKWREQLRRLAAATPPVPCPVPTGLHADLRDYQR
AGLDWLNFLWENRIGGVLADDMGLGKTLQSLALIAKVIEEEPQARFLVVAPTSVISNWAV
EAERFVPGLRIATVTETSGRAKIAFADRIAGAQLVVTSYALMRIGIDEFTSASWSAVFFD
EAQFVKNHASKAHQCARRLDAEVKIAITGTPLENNLMELWSLMALTVPGLFPSAKTFTSY
FRKPIESGTEPGRLALLRRRIRPIMLRRTKHQVATDLPAKQEQVLSISLNAKHDKLYQTR
LTRERQSVLGLLDDFDGNRFQIFRSLTMLRQLSLHAGLVDEKHTDIDSAKIEFLVEQIPE
LIAEGHSALIFSQFTGFLRLLERALDDAGVEYSYLDGSMTARRRTAAIKQFTSGASKVFL
ISLKAGGFGLNLTEADYCFVCDPWWNPAAEAQAVDRAHRIGQTRPVTVYRLVSANTIEEK
VVALQQRKRDLFNAVVDDGDMFGAAIDADDIRELLGGSPAGSDPK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgttcgatcagttatcgcccgcggagtcgggcctgctcgcgcatttcgacgtc
gcgacgataggccgaggtgccgaatacgcacagcaggggcgcgtggctctcgaggactgg
gacccgttgttcatgtcggcgaccgggacctgcgtcggttcgagtggcgacctgtactca
ctcgagatcgggttcggtgacgacgcccgcggatacgcggtcgacgtcgctgagtgcgac
tgtccggtcggtgccaactgcaagcacgcggttgctctggcgctgggggtgatgcgtgca
ggactcctcggtgcgtcgcctcgaggcgtgaggcatgcgtcagcgccgtggcgaacattg
ctgggcgacctcgttgccggggccaccccgaaagagccgggatcggctcccatcggactg
ctcgtcgagctcgacgatcccgagtggatgagcctgaagacggtgacattgcgcctggtg
acccccggtaagaagggcaactgggtacgcacggggatcacgtggagctccatcgagccg
ggacatgtgaccgagtactacaggtccaccaccgaccatccggctgagcacttcgacccc
gttcacctggcacgagtccgtgccgtccacctctgcgccggggacaaacaccagtacggg
acctcccaggttcaccgattggaccaggcgtccgccgagatctggaccgctctacgggcg
gcggtcgacgatggtgtcgtactggtggcgcataagtcgacgggcgcgaaaaaggtcgag
ttgcttccacccgcgtcggccgcgttgaccgtcgatcgcgacgacgagggtctcgtggtg
tccggcggtgtcgacttcccgaccgtcgggccgtctgcggacgacgctttgatgctgttc
ggctcggtacctcacggagcgagcctggtacgaggcggcacgatgttcctggcgccgctc
gtcgacgacgggacgtcgaaagccctccgggcactgctcgacgccgggacgatcgggatt
cccgacaccgacatcgcggagttcgccgacgaggtcctccccgacctcgccggtcggatg
tcggtgaccgtggccgatggcgccgtgacccgacccgagatcaccggtcccgacgcggca
gtcacgcttcgggtcgccgacgatggcggcgcgcacctcgagtggggtgtcgtctaccgc
gtgaacgggagcagacgattcttcccgtccgggcagagctctgggttcggtgacgacgtg
gccgaacgtcgcctgtggaagcaactccgtggccacctcgaagctgcggctcgggtgtgt
gatcgatggcagattcaggtcgccggatttccgggcagcaagttcgcagacgatccggaa
ctcgccgagatgagtcgcgacgaggctctcgcatcggcatcgattgcgctcctgacccgc
cgttaccgttactcgcccgtcgacactgcgcggttcgtcaccgaggtcgccccggagctg
cgggctgacgggatcgaggtggagatcgtcggcgagctccccgactaccgtgccgccgag
gtcgtccccgagatcggtttcggtgccgaacggtccgatgacaacgactggctcggcctg
tcgatcaccgtcgaggtcgacggcgtcgcagtgccgctgcaccaggtgctgacggcgttg
tcgaacggagcgacacacatgctgttgcccgacggggcctatttcgtgctagacaccccg
gagctgcaacgcctggccgaactggtggccgaggcccgcgcactgggtgaactcgaccgt
gggcgggtccgccgggatacgcacaacgccacgttgtgggacgagctgctcgaactgggg
acggtcgacgacgatcttacgaagtggcgcgagcagttgcgtcgtctggccgccgcgaca
ccgccggtgccttgtccggtgccgaccgggctgcatgcggacttgcgtgactatcagagg
gccggcctcgactggctgaacttcctgtgggagaacagaatcggcggagtgctggccgac
gacatggggctgggcaagaccctccagtccctggcattgatcgcgaaggtcatcgaggag
gaaccgcaggctcgctttctcgttgtcgcaccgaccagcgtgatctcgaactgggcggtc
gaagcggaacggttcgtaccaggtctgaggattgcaacggtgaccgagacgagcggacgg
gcgaagatcgcgttcgccgatcgtattgcgggagcgcaactggtcgtcacctcgtacgcg
ctgatgcgcatcgggatcgacgagttcacatcggccagttggtcggccgtgttcttcgac
gaggcacagttcgtcaagaatcacgcgagcaaagctcatcagtgcgctcgccgtcttgat
gccgaggtcaagatcgcgatcaccggcacgccgctggagaacaacctgatggaactgtgg
tcgctgatggcgttgaccgtgccgggtctgttcccgtcggcgaagaccttcacgtcgtac
ttccgcaagccgatcgaaagtggcacggagcccgggcggttggcgttgctacgacgacgg
atccgtccgatcatgctgcggcgcactaagcatcaggttgccacagacctgcccgccaag
caggaacaggtactgtcgatcagcctgaacgcgaagcacgacaagctgtatcagacgcgc
ctcactcgggagcggcagagcgtgctcggcctgctcgacgacttcgacggcaaccggttc
cagatcttccgatcgctcaccatgctccggcaactgagtctgcacgccgggctcgtcgac
gagaagcacaccgacatcgactcggccaagatcgagttcctcgtcgagcaaattcccgag
ctcatcgccgaagggcattccgccctgatcttcagccagttcaccggcttcctccgattg
ctcgaacgcgccctcgacgatgccggagtcgaatacagctacctcgacggatcgatgacc
gcgcgtcggcgaaccgcggcgatcaagcagttcacgagcggggcgtcgaaggtgttcctg
atcagtctcaaggcaggcggtttcgggctgaacctgaccgaggcggactactgcttcgtg
tgtgatccgtggtggaatcccgcggccgaggcccaggccgtggaccgcgcccatcgcatc
ggtcagactcgtccggtcacggtctatcgcttggtgtcggcgaacacgatcgaagagaaa
gtggttgcgctgcaacaacgtaaacgcgacctcttcaacgccgtcgtcgatgacggcgac
atgttcggtgcggccatcgacgccgacgacatccgcgagttgctcggcggctcgccggcc
gggtctgacccgaagtga
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