Gordonia sp. SMJS1: QAD21_02105
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Entry
QAD21_02105 CDS
T10225
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QAD21_02105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_02105
Enzymes [BR:
gos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
QAD21_02105
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QAD21_02105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WGJ86016
LinkDB
All DBs
Position
470616..471338
Genome browser
AA seq
240 aa
AA seq
DB search
MATRRRFRDLAELDAQLIECRACPRLVEWRELVAQEKRRAYADEKYWGRPVAGIGPADAR
LLIVGLAPAAHGGNRTGRMFTGDRSGDVLFSALYRAGLASQPLSVAIGDGLELFDTRITA
PVHCAPPQNKPTVEERDTCSYWLHAELELLAPTVRSVMTLGGFGWQSTLRIFARLGWTVP
KPMPKFGHGVSTTLVRDGAELEVFGCYHVSQQNTFTGRLTVEMVVDVLTAAARAAGIERA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgacgacgcttccgtgatctggcggagctcgacgcgcagctgatcgagtgc
cgtgcatgcccgcgcctcgtcgaatggcgggagttggtcgcgcaggagaagcgacgcgcg
tacgccgacgaaaagtactgggggaggccggtggccggtatcggtccggcggatgcgcga
ctgctgatcgtcggcctcgcccccgcggcgcacggcgggaatcggaccgggcgcatgttc
acgggtgaccgcagcggcgatgtcctgttctcggcgctgtatcgcgccggccttgcgagc
cagccgctctcggtcgcgatcggcgacgggttggagctgttcgacacgcggatcaccgca
ccggtccactgtgcaccaccgcagaacaagccgacggtcgaagagcgcgacacctgttcg
tactggctgcacgccgaactcgaactgctcgcaccgacggtccgttcggtgatgacactc
ggtggattcggttggcagtcaacgcttcgtatcttcgcgaggctcggctggacggtcccg
aagccgatgccgaagttcggtcacggtgtctccaccaccctcgtccgcgacggtgccgaa
ctcgaggtcttcggctgctaccacgtgagccagcagaacaccttcaccggacggctcacc
gtggagatggtcgtcgacgtactcacggcggcggcgcgggcggcggggatcgagagagct
tga
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