Gordonia sp. SMJS1: QAD21_02895
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Entry
QAD21_02895 CDS
T10225
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos00730
Thiamine metabolism
gos01100
Metabolic pathways
gos01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
QAD21_02895 (thiC)
Enzymes [BR:
gos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
QAD21_02895 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WGJ86155
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Position
complement(620671..622359)
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AA seq
562 aa
AA seq
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MGTRVSATRDGSAPADSGFLTLGPIEGSTKHHLTVGDLRVPQRRIHLTNGEHLDVYDTSG
PYTDPTARIDVEKGLAPTRDNWRRPEPVDGASTQLAWARAGIITEEMRFIAAREGIDPEL
VRSEVAIGRAVIPANHRHPESEPMIIGKNFAVKVNANIGNSAVRSSISDEVEKMVWATRW
GADTIMDLSTGADIHTTREWIMRNSPVPVGTVPIYQALEKVNGDPASLTWELYRDTVIEQ
AEQGVDYMTVHAGVLLRYVPLTAKRVTGIVSRGGSIMAAWCLAHHRESFLYTHFDELCEI
FRRYDITFSLGDGLRPGSIADANDEAQFAELRTLGELTAIAKSHGVQVMIEGPGHVPMHK
IAENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEHL
GLPDRDDVKVGVITYKIAAHSADLAKGHPRAQERDDALSKARFEFRWTDQFNLALDPDTA
RAYHDETLPAEPAKTAHFCSMCGPKFCSMRISADVRAYAEEHGLVTADDIDRTIAEGMAA
KSAEFAEAGNRVYLPLQTTGGA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacgtgtatccgcgactcgcgacggcagcgcacccgccgactcagggttcctg
accctcggtccgatcgagggcagcaccaagcaccacctcacggtcggcgacctgcgcgtc
ccgcagcgtcgtatccacctcaccaacggcgaacacctcgacgtctacgacacctcgggt
ccgtacaccgatccgacggcgcgcatcgacgtcgagaagggcctcgcccccacccgcgac
aactggcgccgcccggaaccggtcgacggcgcgagcacccagctagcttgggcgcgggcc
gggatcatcaccgaagagatgcggttcatcgccgcccgagagggcatcgaccccgaactg
gtccggtcggaggtggcgatcgggcgagcggtcatcccggcgaaccaccggcatccggag
tccgaaccgatgatcataggcaagaacttcgcggtgaaagtcaatgcgaacatcggaaat
tcggcggtgcgcagctcgatctccgacgaggtcgagaagatggtgtgggccacccgctgg
ggcgccgacacgatcatggatctctcgaccggcgccgacatccacaccacccgcgagtgg
atcatgcgtaactcgccggtccccgtggggacggttccgatctaccaggcgctggagaag
gtcaacggcgatcccgcctcgctgacctgggaactgtatcgcgacaccgtgatcgagcag
gccgagcagggtgtcgactacatgaccgtgcatgccggtgtcctgctgcgctacgttccg
ctgaccgcgaagcgggtgacgggcatcgtgtcgcgcggcggttcgatcatggcggcctgg
tgtctcgcgcaccaccgggagtcgttcctgtacacgcacttcgacgagttgtgcgagatc
ttccgccgctacgacatcacgttctccctcggcgacggcttgcgccccggatcgatcgcc
gacgcgaacgacgaggcccagttcgccgaactccgcactctcggcgagctgaccgcgatc
gccaaatcgcatggtgtgcaggtcatgatcgaaggccccgggcacgtcccgatgcacaag
atcgccgagaacgtgcgcctggaggaggagttgtgcgaggaggcccccttctacaccctg
ggtccgctcgccaccgacatcgcgccggcctacgaccacatcacctcggccatcggcgcg
gcgatgatcgctcaggccggcaccgcgatgctgtgctacgtgactccgaaagagcattta
ggacttccggaccgcgacgacgtcaaggtcggcgtgatcacgtacaagatcgcggcgcac
tcggccgacctggccaaaggccacccgcgggcacaggaacgcgacgacgcactgagcaag
gcgcgcttcgagttccgctggaccgaccagttcaatctcgccctcgaccccgacaccgcg
cgcgcataccacgacgagacgctgcccgccgagcccgcgaagaccgcccacttctgctcg
atgtgcggacccaagttctgctcgatgcggatctcggcggacgtccgcgcctacgccgag
gagcacggtctcgtcaccgcggacgacatcgaccggactatcgccgagggcatggccgcg
aagtcggccgagttcgccgaggctggtaaccgcgtgtacctcccgctccagacgaccggc
ggcgcctga
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