Gordonia sp. SMJS1: QAD21_05260
Help
Entry
QAD21_05260 CDS
T10225
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03020
RNA polymerase
Brite
Enzymes [BR:
gos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QAD21_05260
Transcription machinery [BR:
gos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QAD21_05260
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QAD21_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WGJ86567
LinkDB
All DBs
Position
1149465..1153421
Genome browser
AA seq
1318 aa
AA seq
DB search
MLDVNFFDELKIGLATADDIHNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTKAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDELRHNELSTLEAEMEVEKKAVADQRDVDLNERQQKLEQD
LAELEAEGAKADVRRKVRDGADREMRRMRDAAQRELDGLEEIWDKFVKLAPGDLIIDEKL
YRQLEERYGEYFQGSMGAEAIKKLLETFDIDAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNQAQNIKSAKRMVERQR
PAVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTLKEGAAGEYT
AANGDDVERGVYSTPAEAIMAVDRGVLTVQSRIKVRLTDQRPPADIEAEQFPDGWKYGSP
WDIETTLGRVLFNELLPIEYPFVNEQMPKKRQAVIINDLAERYPMIVVAQTVDKLKDVGF
YWATRSGVTVSMADVLVPPQKAEILDKYEERADGLERKFQRGALTPDERRDSLVEIWKQA
TEEVGAAMEAHYPDDNPIPMIVKSGAAGNMTQIRSLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVAEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTERGITTTI
AEKQADGTLIRDAHVETSTYARTLAQDAVDADGNVIVERGHDLGDPAIEALLAAGITQVK
VRSVLTCGTGTGVCAMCYGRSMATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHQGGVG
DDITGGLPRVQELFEARVPKGVAPIAEVSGRVRLEDDDRFYKITLIPDDGSEEVVIDKIS
KRQRLRVFKHDDGSERLLADGDHVEVGQQLMEGSANPHEVLRVMGPRQVQIHLVNEVQEV
YRSQGVSIHDKHIETIVRQMLRRVTIIDHGSTEFLPGSLVERAEFEAANRQVVTEGGEPA
AGRPVLMGITKASLATESWLSAASFQETTRVLTDAAINSRSDKLIGLKENVIIGKLIPAG
TGINRYRNIQVQPTEEARAAAYAVPSYDDTYYSPDGTFGAPAGAAVPLDDYGFSNDYR
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaactttttcgacgaactgaagatcggcctggccacggccgacgacatc
cacaactggtcatacggtgaggtcaagaagccggagacgatcaactaccgcacgctcaag
ccggagaaggacggcctgttctgcgagaagatcttcggcccgacccgcgactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgaccaaggccaaggtgcgccgtgagcgcatgggccacatcgagctggccgccccg
gtcacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcctacgtgatcacagcggtcgac
gacgagctccgtcacaacgagctctcgacgctcgaggccgagatggaggtcgagaagaag
gctgtcgccgatcagcgcgacgtcgacctcaacgagcgtcagcagaagctcgagcaggat
ctcgccgagctggaggccgagggtgccaaggccgacgtgcgccgcaaggtgcgcgacggt
gccgaccgcgagatgcgtcgtatgcgcgacgccgctcagcgtgagctcgacggtctcgag
gagatctgggacaagttcgtcaagctcgccccgggcgacctcatcatcgacgagaagctc
taccgtcagctcgaagagcgctacggcgagtacttccagggttcgatgggcgccgaggcg
atcaagaagctcctggagaccttcgacatcgacgccgaggccgagtcgctgcgcgagacc
atccgcagcggcaagggccagaagaagctgcgcgcgctcaagcggctcaaggtcgtcgcg
gcgttccagcagtcgggcaactcgccgctgggcatggttctcgacgccgttccggtgatc
ccgccggagctgcgtccgatggttcagcttgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgatctg
ggtgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggagtcggtcgacgcc
ctgttcgacaacggtcgtcgtggccgtccggtcaccgggccgggcaaccgcccgctgaag
tcgttgagcgatctgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggtccgcagctcaagctgcaccag
tgtggtctgccgaagttgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccaggcgcagaacatcaagtcggccaagcgcatggtcgagcgtcagcgc
cccgcggtgtgggacgtcctcgaagaggtcatcgccgagcatccggtgctgctgaaccgt
gcaccgacgctgcaccgcctcggcatccaggccttcgagccgcagctggtggagggcaag
gccattcagctccacccgctggtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcacctcccgctgtcggcggaggcgcaggccgaggcgcgcatcctgatgctg
tcgtcgaacaacatcctgtcgccggcgtcgggccgtccgctcgccatgccgcgtctggac
atggtgaccggtctgtactacctgaccaccctcaaggagggtgcggcaggcgagtacacc
gcggccaacggcgacgacgtcgagcgcggcgtgtactcgaccccggccgaggccatcatg
gccgtcgaccgcggtgtgctgaccgtgcagtcgcgcatcaaggtgcgtctgaccgaccag
cgtccgccggccgacatcgaggccgagcagttccccgacggctggaagtacggctcgccg
tgggacatcgagaccacgctgggccgggtgctgttcaacgagctgttgccgatcgagtac
ccgttcgtcaacgagcagatgccgaagaagcgtcaggccgtgatcatcaacgatctcgcc
gagcgctacccgatgatcgtggtcgcccagaccgtcgacaagctgaaggacgtcggcttc
tactgggccacccgttcgggtgtcacggtctcgatggccgacgtgctggtgccgccgcag
aaggcggagatcctcgacaagtacgaggagcgggccgacggtctggagcgcaagttccag
cgcggtgccctcaccccggacgagcgtcgtgactccctcgtggagatctggaagcaggcg
accgaagaggtcggcgcggccatggaggcgcactacccggacgacaacccgatcccgatg
atcgtgaagtcgggtgcggcgggcaacatgacccagatccgctcgctggcgggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgtccgatcaagtcctcgttccgc
gagggcctgaccgtggccgagtacttcatcaacacgcacggtgcccgaaagggtctggcc
gacaccgcgcttcgtaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgtgcgcgagaccgactgtggcaccgagcgtggcatcaccacgaccatc
gccgagaagcaggccgacggcacgctcatccgtgacgcgcacgtcgagacctcgacctac
gcccgcacgctggcgcaggacgcggtcgacgccgacggcaacgtcatcgtcgagcgcggt
cacgacctgggcgacccggccatcgaggccctgctcgccgccggcatcacgcaggtgaag
gtccgttcggtcctgacctgtgggaccggcaccggtgtgtgtgcgatgtgctacggccgt
tcgatggccaccggcaagctcgtcgacatcggcgaggccgtcggtatcatcgcggcccag
tcgatcggtgagcccggtacccagctgacgatgcgtacgttccaccagggtggcgtcggt
gacgacatcaccggtggtctgccgcgtgtccaggagctcttcgaggcccgcgtccccaag
ggcgtggcgccgatcgcggaggtctccggccgggtgcgcctcgaggacgacgaccgcttc
tacaagatcactctcatcccggacgatggttcggaagaggttgtcatcgacaagatctcg
aagcgtcagcgtctgcgcgtgttcaagcacgacgacggttccgagcggctcctcgccgac
ggtgaccacgtcgaggtcggccagcagctcatggagggctcggccaacccgcacgaggtg
ctccgcgtcatgggtccccgtcaggtgcagatccacctggtcaacgaggtccaggaggtc
taccgcagccagggtgtgtcgatccacgacaagcacatcgagaccatcgtgcgtcagatg
ctgcgtcgcgtgacgatcatcgatcacggttcgaccgagttcctgcccggttcgctcgtc
gagcgtgccgagttcgaggcggccaaccgtcaggtcgtgaccgagggtggcgagcccgca
gccggacgtccggtgctgatgggtatcaccaaggcctcgctggcgaccgagtcgtggctg
tcggcggcgtcgttccaggagaccacgcgtgtcctgaccgacgcggcgatcaacagccgc
agcgacaagctgatcggtctgaaggagaacgtgatcatcggtaagttgatcccggccggt
accggtatcaaccgctaccgcaacatccaggttcagccgaccgaggaagctcgtgccgcg
gcgtacgcggtgccgtcctacgacgacacctactacagcccggacggcaccttcggtgct
ccggccggcgctgcggtgccgctggacgactacgggttctccaacgactaccggtag
DBGET
integrated database retrieval system
