Gordonia sp. SMJS1: QAD21_07925
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Entry
QAD21_07925 CDS
T10225
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos00260
Glycine, serine and threonine metabolism
gos00460
Cyanoamino acid metabolism
gos00630
Glyoxylate and dicarboxylate metabolism
gos00670
One carbon pool by folate
gos00680
Methane metabolism
gos01100
Metabolic pathways
gos01110
Biosynthesis of secondary metabolites
gos01120
Microbial metabolism in diverse environments
gos01200
Carbon metabolism
gos01230
Biosynthesis of amino acids
gos01240
Biosynthesis of cofactors
gos04981
Folate transport and metabolism
Module
gos_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QAD21_07925 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QAD21_07925 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QAD21_07925 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QAD21_07925 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QAD21_07925 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QAD21_07925 (glyA)
Enzymes [BR:
gos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QAD21_07925 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
WGJ87029
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Position
1729143..1730450
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AA seq
435 aa
AA seq
DB search
MTANPSSLNSMSLAELDPDVAAAMNGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNKY
AEGYPGRRYYGGCEYVDVVEDIARNRAKELFGADFANVQPHSGAQANAAVLQALMEPGET
MLGLDLAHGGHLTHGMRLNFSGKLYENAFYGVSKEDFRIDMDEVRKIALDVKPKVIVAGW
SAYPRTLDFEAFRSVADEVGAHLWVDMAHFAGLVAAGLHPSPVPHADVVSSTVHKTLGGP
RSGIILAKQEWAKKLNSAVFPGQQGGPLMHAIAGKAVALKIAATDEFAERQRRTLSGARL
LAERLNGSDVAGAGVSVLTGGTDVHLVLVDLRNSALDGQQAEDLLHQVGITVNRNAVPFD
PRPPMVTSGLRIGTPALATRGFGDEQFTEVADIIATALAAGDAADVSALRGRVSKLALDF
PLYDGLEEWGLMSRI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgaacccgtcatccctgaactcgatgtccctggcagagctcgaccccgacgtc
gcagccgccatgaacggtgaactcagccgccagcgggacaccctcgagatgatcgcctcg
gagaacttcgtgccgcgtgcggtgctgcaggcccagggcagcgtgctgaccaacaagtac
gccgaggggtacccgggacgtcgctactacggcgggtgcgagtacgtcgacgtcgtcgag
gacatcgcccgcaaccgggcgaaggagctgttcggcgccgacttcgccaacgtgcaaccg
cattcgggtgcccaggccaacgccgcggtgctgcaggccctgatggagccgggggagacc
atgctcggtctcgacctcgcgcacggcggtcacctcacccacggcatgcgcctgaacttc
tccggcaagctctacgagaacgccttctacggcgtgagcaaagaggacttccgcatcgac
atggacgaggtgcgcaagatcgccctcgacgtcaaaccgaaggtcatcgtcgccgggtgg
tcggcctacccgcgcacgctcgacttcgaggcgttccgctccgtcgccgacgaggtcggc
gcacacctctgggtcgacatggcccacttcgccggtctcgtcgccgccggcctgcatccg
tcgccggtcccgcatgccgacgtcgtgtcctcgaccgtgcacaagaccctcggcggcccg
cgttcggggatcatcctggccaagcaggagtgggccaagaagctgaactcggcggtgttc
cccggtcagcagggcgggccgctcatgcacgcgatcgccggtaaggcggtggccctgaag
atcgccgccaccgacgaattcgccgagcgccagcggcgcaccctgtccggggcgcggctc
ctcgccgaacgcctcaacggctcggatgtggccggggccggcgtctcggtcctgaccggc
ggtaccgacgtccacctcgtgctcgtcgatctgcggaacagcgccctcgacggccagcag
gccgaggacctgctgcatcaggtcggcatcaccgtcaaccgcaatgcggtgccgttcgat
ccgcgaccgccgatggtcacctcgggtctacgtatcggcaccccggcactggccacccgc
ggcttcggcgacgaacagttcaccgaggtcgccgacatcatcgccaccgcgctcgcggcc
ggcgatgccgccgacgtctcggccctgcgcgggcgcgtgtccaagctcgccctcgacttc
ccgctctacgacggtctcgaggagtggggcctgatgagccggatctga
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