Gordonia sp. SMJS1: QAD21_09985
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Entry
QAD21_09985 CDS
T10225
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QAD21_09985 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_09985 (mutM)
Enzymes [BR:
gos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QAD21_09985 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QAD21_09985 (mutM)
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QAD21_09985 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Tautomerase
NFACT_N
TackOD1
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
WGJ87387
LinkDB
All DBs
Position
2191839..2192750
Genome browser
AA seq
303 aa
AA seq
DB search
MPELPEVETVRIGLETHLVGRVVASTEVLHPRAVRRHAGGEPDLIGRLAGKRVTGVRRRG
KYLWIDVADSADRAALVVHLGMSGQMLIARTGTPDHTHLRIRAVLDDENELRFVDQRTFG
GWHLDDYTPDVYAPSGSTDTTDPSPADIPVSVAHIATDPFDPAFDPVRVVDRMRAKHSEI
KRVLLDQTVISGVGNIYADEALWRARLHGSRIAETISRKKLRELIDAVTDVMADALKVGG
TSFDALYVNVNGQSGYFERSLNAYGRAGEPCRRCGAIMRREQFMNRGSFSCPRCQRASKA
NPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaggtcgagaccgtccgcatcggtctcgagacccatctcgtcggt
cgggtggtggcctcgaccgaggtccttcatccgcgcgcggtccgtcgtcacgccggcggt
gagccggatctgatcggtcggctcgccggcaagcgggtgaccggcgtccggcgccgcggc
aagtacctgtggatcgatgtcgccgactccgccgaccgtgcggcgctcgtcgtccacctc
gggatgagtggccagatgctgatcgcccggaccggaactcccgatcacacgcacctgcgg
atccgcgcggtcctcgacgacgagaacgaactccgcttcgtcgatcagcggaccttcggg
ggttggcatctcgacgactacacacccgatgtgtatgcgccctcggggagtacggacacg
accgacccgtcgcccgccgacatcccggtctcggtggcgcacatcgcaaccgatccgttc
gacccggccttcgatcccgtccgcgtggtggatcgcatgcgcgccaaacactccgagatc
aaacgggtcctgctggatcagacggtgatctccggcgtcggcaacatctacgccgacgaa
gcgctgtggcgcgcacgtctgcacggctcgcggatcgccgagacgatcagtcgcaagaaa
ctgcgcgaactcatcgatgccgtcaccgacgtgatggcggatgcgctgaaggtcggcggt
acctcgttcgacgcgctctacgtgaacgtcaacggacagtccggctacttcgagcggtcc
ctgaacgcctacggacgggcgggggagccgtgtcgtcggtgcggcgcgatcatgcgccgc
gagcagttcatgaaccgtggctcgttctcgtgtccgcgatgccagcgggcgtcgaaggcg
aacccgggctga
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