Gordonia sp. SMJS1: QAD21_10030
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Entry
QAD21_10030 CDS
T10225
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos02024
Quorum sensing
gos03060
Protein export
gos03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QAD21_10030 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QAD21_10030 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QAD21_10030 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gos02044
]
QAD21_10030 (ffh)
Enzymes [BR:
gos01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
QAD21_10030 (ffh)
Secretion system [BR:
gos02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QAD21_10030 (ffh)
Eukaryotic Sec-SRP protein
QAD21_10030 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
AAA_24
ArsA_ATPase
APS_kinase
AAA_31
nSTAND3
TctA
Zeta_toxin
MeaB
CLP1_P
NPHP3_N
AAA_18
AAA_16
AAA_33
Thymidylate_kin
TsaE
MobB
6PF2K
ATP_bind_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WGJ87395
LinkDB
All DBs
Position
2204438..2206003
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AA seq
521 aa
AA seq
DB search
MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLAVVRSFIARIKERAK
GAEVSAALNPAQTVVKIVNEELIGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL
GNWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTSVGGEGVLGVTSGDP
VSVAQAGVDEARSKHYDVVVIDTAGRLGIDAELMKQASDIRDATSPDEVLFVVDAMIGQD
AVTTAEAFQEGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD
RMASRILGMGDVLSLIEQAEQHWDAQQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN
ILGMLPGAGQMKDVLSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRIRIANGSGVTV
SEVNQLVDRFFEARKMMAQMSGRMGMGAMNRKSNRKGKKGKKGKSRGPTPPKAARGGFPG
MPGGMPAGFPDLSNMPAGLDQLPPGLEGIDVSQFQQPKKKK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattccctctccgaccggttgaccggtgccctgaaggatctgcgtggcaagggg
cggctgtccgacgccgacatcgaccgcacctgccgcgagatccggctcgccctgctcgag
gcggacgtctcgctcgcggtggtccggtccttcatcgcccggatcaaggagcgcgccaag
ggtgccgaggtctccgcggcactcaacccggcgcagacggtcgtcaagatcgtcaacgag
gaactcatcggaatcctcggcggggagacgcggcgggtgcggttcgccaagaaccccccg
accgtcatcatgttggccggtctccagggtgccggtaagacgacactcgccggaaagctg
ggcaactggctcaagcagcagggtcacaccccgctgctcgtcgcctgtgacctgcagcgt
ccgggcgcggtctcacagctgcagatcgtcggcgagcgcgccggcgtaccggtcttcgcg
ccgcatccgggcacgagcgtcggcggcgagggtgtgctcggtgtgacctcgggcgatccg
gtctcggtcgcgcaggccggtgtcgacgaggcgcggagcaagcactacgacgtggtggtc
atcgacaccgccggccggctcggcatcgacgccgaactgatgaagcaggcctccgacatc
cgcgacgccacctcgcccgacgaggtgctgttcgtcgtcgacgcgatgatcggtcaggac
gccgtcaccaccgccgaggccttccaggagggtgtgggcttcaccggcgtcgtgctgacc
aagctcgacggcgatgcgcgcggcggtgcggcgttgtcggtacgcgaggtgaccggccaa
ccgatcatgttcgcgtcctcgggcgagaagctcgaggacttcgacgtcttccatcccgac
cgcatggccagccgcatcctcggcatgggcgacgtgttgtcgctcatcgagcaggccgaa
cagcactgggatgcgcagcaagccgaggccgcggccgccaagatcacccagggcgagctg
accctcgaggacttcctcgagcagatgctgatgatccgcaagatgggccccatcggcaac
atcctggggatgttgcccggcgccggccagatgaaggacgtgctgtcgcaggtcgacgac
aagcagctcgaccgcgtgcaggcgatcatccgcggcatgacccccgccgagcgcgacaac
ccgaagatcatcaacgcctcacgccggatccggatcgccaacgggtcgggtgtgaccgtc
agcgaggtcaaccagctcgtcgaccggttcttcgaggcccgcaagatgatggcgcagatg
tcgggtcgcatgggcatgggcgcgatgaaccgcaagtccaaccgcaagggcaagaagggc
aagaagggcaagagccgcggccccaccccgccgaaggcggcgcgcggcggcttccctggt
atgcccggaggcatgccggccgggttcccggacctgtcgaacatgccggccggtctcgat
cagctgcccccgggtctcgagggcatcgacgtgtcgcagttccagcagcccaagaagaag
aaatga
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