Gordonia sp. SMJS1: QAD21_11320
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Entry
QAD21_11320 CDS
T10225
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QAD21_11320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_11320
Enzymes [BR:
gos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QAD21_11320
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QAD21_11320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
zf-CHY
Zn_ribbon_6
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
WGJ87606
LinkDB
All DBs
Position
2475328..2477292
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AA seq
654 aa
AA seq
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MARVLPVLGLAHLDRPFDYLIDVDQDEDAQPGVRVRVRFSGRLVDGYLLERIEKSDHPGK
LGWLDRVVSAEPVLTPQLATLCRAVADRYAGTMGDVVRLAIPPRHARTEKETTPDPAAVV
ESPDLADWHRYALADSYVENLADSHPRAVWQALPGEDWPRRLAELAAATLAGGRGCILVV
PDQRDLDRVWAECEPLIGDRGVALSAGLGPTARYRRWLAVRRGAAQLVIGTRSAVFAPVK
DLGLVVVWDDGDDSMADPRAPYPHPREVAVLRSHHERCGLLLGGFARTAEAQALVVSGWA
HDLVADRTTVRTRSPRVQAISDDDRQIARDPMARSARIPEVAFDAARSAFAADRPVIFSV
PRRGYVPSLACTRCREHARCRACHGPLQLDADQRLSCRWCGRPERSFRCPECGNTSVRAT
VTGARRTAEELGRAFAGVPVLTSGGNTILDEIEPGARLVVATPGAEPVAPGGYGAAIVVD
TWAQLDRADLRAEEHAVRRWMALAAMVTPHGDGGRVVIVADSALAPVQALIRWDPVGFAS
IQLQERVELGFPPAVTMASVDGPTGVITDFVEHLELPSDADVLGPVPLPPGVRPPAGSAE
WEAAADDEMDRILVRLPRKHGRLLAEALVAGQVRRNTHRQTGPIRVQIDPPTIG
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgtgttcttcctgttctggggctcgcgcacctcgaccgtcccttcgattacctg
atcgacgtcgaccaggacgaggacgcgcagcccggtgttcgtgtccgcgtgcgattctcg
ggtcggctcgtcgacggctacctcctcgagcgcatcgagaagagcgatcatcccggcaag
ctgggctggctcgaccgggtcgtgtccgccgagccggtactgaccccgcagctggcgacg
ctgtgccgtgcggtggccgatcggtacgcgggcacgatgggcgacgtcgtgcgcctggcc
ataccgccgcggcatgcgcgcaccgagaaggagacgacacccgacccggccgctgtcgtc
gaatcgcccgacctcgccgactggcatcggtatgccctggccgactcctacgtggagaac
ctggccgacagtcatccgcgtgccgtctggcaggccctaccgggggaggactggccgcgc
cgtctcgccgaactcgccgcggcgaccctcgcagggggacgcgggtgcatcctcgtcgtt
cccgatcagcgtgatctcgatcgggtgtgggccgagtgtgagccgttgatcggcgaccgt
ggggtcgcgctgtccgccggactcggacccaccgcgcgctaccgccgatggctggccgtg
cgccgcggtgccgcgcagctggtgatcggtacccgaagcgcggtgttcgcgccggtcaag
gacctgggcctggtcgtcgtgtgggatgacggcgacgacagcatggccgacccacgggcg
ccctacccgcatccccgcgaggtggcggtgctgcggtcgcaccacgagcggtgcggcctg
ctgctcggcgggttcgcccggaccgccgaggcgcaggcgctggtggtctcgggctgggcg
cacgacctcgtcgccgaccgcacgacggtccgcacccgcagcccccgtgtccaggcgatc
tccgacgacgaccggcagatcgcacgcgaccccatggcccggtcggcgcgcatccccgaa
gtcgcgttcgacgcggcgcggtcggcgttcgccgccgatcgtccggtgatcttcagcgtc
ccgcgccggggttacgtgccgtcgctcgcatgcacccgctgccgcgaacacgcgcggtgc
cgggcctgtcacggaccgttgcagctcgatgccgaccaacgactgagctgccgatggtgc
ggacggcccgaacggtcgttccgctgcccggagtgcggtaacacctcggtgcgcgcgacg
gtgaccggtgcgcgccggaccgccgaggagctgggacgtgctttcgccggcgtgccggtg
ctgaccagcggcggcaacacgatcctcgacgagatcgaacccggcgcacggctcgtcgtc
gcgacgccaggcgcggagccggtggccccgggcggatacggcgccgcgatcgtcgtcgac
acctgggcccagctcgaccgggccgacctgcgtgccgaggagcacgcggtccggcggtgg
atggcgctcgccgcgatggtgaccccgcacggtgacggtgggcgagtggtcatcgtggcc
gactcggcgctcgcacccgtgcaggccctgatccgttgggacccggtgggtttcgcgtcg
atccagttgcaggaacgcgtggaactcggattccccccggcggtgacgatggcgtcggtc
gacgggccgaccggggtgatcaccgacttcgtcgaacacctcgagttaccctccgacgcc
gatgttctcggcccggtgccgttgccgcccggcgtccgcccgccggccggcagtgccgag
tgggaggccgccgccgacgacgagatggatcgcatcctggtgcggttgccgcgcaagcac
ggacggctcctcgccgaggcgctcgtcgcgggccaggtgcgccgcaacacacatcgacag
accgggccgatccgggtgcagatcgacccgcctacgatcggatga
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