Gordonia sp. SMJS1: QAD21_13730
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Entry
QAD21_13730 CDS
T10225
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QAD21_13730 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_13730 (recC)
Enzymes [BR:
gos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QAD21_13730 (recC)
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QAD21_13730 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WGJ83894
LinkDB
All DBs
Position
complement(2986669..2990127)
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AA seq
1152 aa
AA seq
DB search
MLILHRAERTDTLADALAEVLAHPLGDPMRPEIVSVPAAGVERWLAQHLARRLGAGAGDD
GIAANIDFTGPPRLADAIVAAVLGDTRLNTSGSLTAPDDPWRAAELTWPVLRVLDDRVDD
PALDVIARHIGAGDTSSPRIGRRYATARHLAELFDRYGRSRPSLIADWAAGHDLDGAGRP
LRDDLAWQPGFWRAVRAEIGRPHPAEDLAAVCDRLRTDPAAGRLPERLSVFGPTRITESF
RQIAAAAAVHHDVHLFVPHPSPRLWADLGALVDPDSGNGVPPRRGECELPELRNPLLAGL
SRDLQELQLRLAPIVDRDLHHVPRESVLGDTALHVVQSGIRDDLAPAPGLTDTSDQTDTS
DPTVSADPSVEVHACHGPERQIEVLRDRLLHLFAADPELQPRDVLIMCPDVETYAPLIRG
AFGQAGLPHPAFDLRVRLADRGIRHVNPILDVIVGVVELAAGRVTAGDVVDLLGAPPVRT
RFAMTDDDLDLIREWLAHSNVRWGIGVAERARYGLERFRQGTFDAGLDRIALGVVAEEAD
DEWLGTALPLAGVESTGIDLVGRFDEFLDRLGRVLAELREAAPAHRWAETLIDAVSSLTA
TEPAEDWQRAQAIRMLSEAFGDTRPVEPEEVLRLADVRDLLSALVSGRPTRSNFRTGELT
VCTMVPMRSVPHRVIVLLGIDAEVFPRVQRIDGDDVLGVDPLVGERNPRDEDRQCFLDAI
CAAQDALLVFYSGADPVSGRRIPPAVVVSELVDTLTGLTGVSPVRRHSLHGFDARNFTPG
GVPGIAGPFSHDASMLRGAEALREPTRRVVVAAAEVLPAPERTPDTEDIDLATLIDFHVD
PIVAFVRQRLGARIPDDDRPHDDQLDVELEPLDKWGIGDRFLSRMLTGVSIGECEAAELR
RGTLPPFAFGTRELRAISRTVTRLYGVVEPLRTGTPTTLDVLVRLPDGRRVHGTVGDVFG
DTVPAALVRPTYSKLKAKQQLSGWITLLAVAAAATQGNAAARSVDSAVLIGRAPRGGGTS
TITLRRPADPVPLLHDLVRLRDEGLRRPLPLPLEPAYTFVENDGPGRRSTFSLANARRNF
DDRFGAAHDPYVKLAFGGDVLAEVDFDDLLDGATPDHRTVGGVELPMGDDEPLFAGLART
VWVPLDEHREGT
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcctgcaccgcgccgaacgcaccgacacgctggccgatgcgctggccgaggtc
ctcgcgcacccgctgggcgacccgatgcgcccggagatcgtgtcggttcccgccgcggga
gtcgagcggtggctcgcccagcatctggcccgacgcctgggggcaggggccggcgacgac
gggatcgcggccaacatcgatttcaccggaccgccccgcctggctgacgccatcgtcgcg
gcggtgctcggtgacacgcgtctgaacacctcgggctcgctgacggcgccggacgatccg
tggcgcgcggccgaactgacgtggccggtgctgcgtgtcctcgacgaccgcgtcgacgac
cccgcgctcgacgtgatcgcgcggcacatcggcgcgggcgacacctcctcgccccggatc
gggcgccgctacgccaccgcacgccatctggccgagttgttcgaccggtacgggcggtcg
cgtccgtcgctgatcgccgactgggccgccggccacgatctcgacggtgccggccgcccc
ctgcgggacgacctggcgtggcagcccgggttctggcgtgcggtccgcgccgagatcggc
cggccgcatcccgcggaggatctcgccgcggtctgcgatcggctgcgcaccgaccccgcg
gcggggagattgccggaacgactgtcggtcttcgggccgacgcggatcaccgagtcgttc
cgtcagatcgccgcggccgcagccgtccaccacgatgtccacctgttcgtgccccacccg
agtccgcggctgtgggcggacctcggtgccctcgtcgaccccgactccggcaacggggtc
ccacctcgacgcggggagtgcgagctccccgaactgcgaaaccccctgctcgccggtctc
tcccgtgatctgcaggaactccagttgcggctcgctccgatcgtcgatcgggacctgcac
catgtgccgcgggagtcggtgctgggcgacaccgcgctgcacgtcgtccagtcggggatc
cgcgacgacctggctcccgcgcccggcctcaccgacacgtcggaccagaccgacacgtcg
gacccgaccgtctccgcggacccgtccgtagaggtgcacgcgtgtcacgggcccgagcgg
cagatcgaggtcctgcgggatcggttgctgcatctgttcgccgccgatcccgagctgcag
ccgcgcgatgtcctcatcatgtgcccggacgtcgagacctacgcacccctgatccgtggc
gcattcggacaagcgggactgccgcatccggcgttcgatctgcgagttcggctcgccgac
cgtggaattcgccatgtgaacccgatcctcgacgtgatcgtcggagtcgtggagctggcc
gcgggccgggtgaccgccggtgacgtcgtcgacctcctcggcgccccgccggtacgaacc
cggttcgcgatgaccgacgacgacctggatctgatccgggaatggctggcgcacagcaac
gtccggtgggggataggcgtcgccgaacgcgcccgctacggtctcgaacggttccgccag
ggcaccttcgacgccggcctggaccgcatcgccctcggcgtcgtcgccgaggaggccgac
gacgaatggctcggtactgcactgccgctcgccggagtggagagcaccggcatcgatctc
gtcggtaggttcgacgagttcctcgaccgactcggtcgggtgctggccgaactgcgggaa
gccgctcccgcgcaccgatgggcggagacgctcatcgacgccgtctcgtcgctgacggcg
accgagcccgccgaggattggcaacgcgcacaggcaatccggatgctcagcgaggccttc
ggggacacccgaccggtcgagccggaggaggtgctgcgtctggcggacgtgcgggacctc
ctatcggcgctggtctccggccggccgacgcgctcgaacttccgcaccggagaactgacg
gtgtgcacgatggtgccgatgcgctcggtgccgcaccgggtgatcgtgctgctcgggatc
gacgccgaggtgttcccgcgtgtccagcggatcgacggggatgacgtactcggcgtcgat
ccgctggtgggcgaacgcaatccgcgggacgaggaccggcagtgtttcctcgacgcgatc
tgcgccgcgcaagatgccctcctcgtcttctacagtggcgccgaccccgtctccggccgg
cggatcccgcccgctgtggtcgtgagcgaactggtcgacacgctcaccggtctgaccggc
gtgagtcccgttcgccggcattcgctgcacgggttcgacgcgcggaacttcacccccggt
ggcgtgccgggaatcgcggggccgttcagccacgacgcgtcgatgcttcgcggagccgag
gccttacgcgagccgacgcggcgcgtggtggtcgccgctgccgaggtgctgcccgcgccg
gaacggacccccgacaccgaggacatcgacctcgcgaccctcatcgacttccacgtggac
ccgatcgtggcgttcgtccgccagcgcctcggtgcccgcatccccgacgacgaccggcca
cacgacgaccaactcgatgtcgaactggaaccactggacaagtgggggatcggcgaccga
ttcctctcccggatgctgaccggggtgtccatcggggagtgcgaggcggccgagctccgg
cgcgggacgctgccgccgttcgccttcggcacccgtgagctccgcgcgatctcgcggacg
gtcacgcggctatacggcgtcgtcgagccgttgcgcacagggactcccacgaccctcgac
gtcctggtccgactacccgacggccgccgggtgcacggaacggtcggtgacgtgttcggc
gacaccgtgccggccgcgttggtgcggccgacgtactccaagctcaaggccaaacagcaa
ctcagcggctggatcacgcttctcgcggtggccgccgccgcgacccagggcaatgccgcg
gcgcggtcggtggactcggcggtcctgatcgggcgggccccgcgaggcggcgggaccagc
accatcacactccggcgccccgcggatccggttccgttgcttcacgacctcgtccggcta
cgtgacgagggtcttcgtcgtccgctgccgctgccgctggaacccgcgtacacgttcgtc
gagaacgacgggcccggccggcgcagcacgttctcgctcgccaacgcccgccggaacttc
gacgacagattcggtgccgcgcacgacccatatgtgaagctcgcattcggcggggacgtg
ctggccgaggtcgatttcgacgacctcctcgacggcgcgacgcccgaccatcgcaccgtc
ggcggtgtcgaactgcccatgggtgacgacgaaccgttgttcgccgggctggcgcgaacc
gtgtgggtgccactcgatgagcaccgggagggcacgtga
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