Gordonia sp. SMJS1: QAD21_15020
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Entry
QAD21_15020 CDS
T10225
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos00470
D-Amino acid metabolism
gos00550
Peptidoglycan biosynthesis
gos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QAD21_15020 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QAD21_15020 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gos01011
]
QAD21_15020 (murD)
Enzymes [BR:
gos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
QAD21_15020 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gos01011
]
Precursor biosynthesis
Amino acid ligase
QAD21_15020 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WGJ84107
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All DBs
Position
complement(3307597..3309081)
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AA seq
494 aa
AA seq
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MSATRFLVTLGAHVLLADDRFAGADAPPVDRNAAAAAVAGVTELMSQGVEPVAVADLLTG
SGRLATAKVVIVSPGFAPTHHLVAAAAAAGVPVWGEVELAWRVDVAGLLGEPRTWLVVTG
TNGKTTTTSMLAGIVEASGRRGAACGNIGLPVLDAMQAEPRVDVLCAELSSFQLHWAPSV
RPHAGVVLNVAEDHLDWHGTFEAYALAKAGALRGAVSVVGLDDPVASGLPAAGRRIGFTL
REPQPGQLGVADGVLIDRAFDAGRLYDADEVRPAGPSGVADALAASALALAAGIGPEAIR
AGLASFRPAGHRGEVVASRDGIDFVDDSKATNPHAAQAAVAAFDRVVLIAGGLLKGASMD
EMLTAVGSRLAGVVAIGRDRDLVIEAIARHAPEVPTVTVFTGDDGTVNVHRPGQAGPQAS
AADLPGTGSSTSVAVMDRAVEEAWVLAEASPSAPDAVLLAPAAASLDMFAGYGARGDAFA
AAARRIAGSPDTGR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccacccggttcctggtgacgctcggcgcgcatgtcctgctcgccgacgaccgg
ttcgccggtgctgacgcgccgcccgtcgaccggaacgccgcggccgcggcggtcgccggg
gtcaccgaactgatgtcgcagggcgtcgaaccggtcgccgtcgcggatctgctcaccggt
tccgggcgactggcgacggccaaggtcgtgatcgtgtcacccggcttcgcgcccacccac
cacctggtggcggccgcggccgccgccggcgtaccggtctggggcgaggtcgaactggcc
tggcgcgtggacgtcgcgggactgctgggcgaaccacgcacctggcttgtcgtgaccggc
accaacggcaagacgacgaccacgtcgatgctcgccgggatcgtcgaggcgtcgggccgc
aggggtgcggcctgtggcaacatcgggctcccggtgctcgacgcgatgcaggccgagccc
agggtggacgtgctgtgcgccgaactgtcgtcatttcagctgcattgggcgccgtcggtc
cgtccgcatgcgggagtcgtgctcaacgtggccgaggatcacctcgactggcacgggacc
ttcgaggcgtacgcacttgccaaggcgggagcgctgcgcggtgcggtgagtgtcgtcgga
ctcgacgacccggtcgcgtccggcctgcccgccgcgggccgccgcatcggtttcacgctg
cgcgagccgcagcccggacaactcggcgtcgcggacggtgtgctgatcgaccgcgccttc
gacgcgggccggttgtacgacgctgacgaggtgcgcccggccggaccgtcgggtgtcgcc
gatgcgctggccgcgtcggctctcgcgctcgcggccggcatcgggccggaggcgatacgg
gcggggctggcgtccttccggccggccggtcatcgcggcgaggtcgtcgcctcgcgggac
gggatcgacttcgtcgacgactccaaggccaccaacccccacgccgcccaggcggcggtc
gccgccttcgaccgggtcgtgctgatcgcgggcggtctgctcaagggtgcgtcgatggac
gagatgctcaccgcggtgggcagtcggctggccggggtggtcgcgatcggccgtgaccga
gacctggtgatcgaggcgatcgcgcgacacgccccagaagtcccaacagtcacagtattc
acaggggacgatggcacggtgaacgtgcatcgtccgggacaggccggtccccaagcctca
gcagctgatctcccggggacgggctcctcgacatcggtggcggtcatggaccgggccgtc
gaggaggcgtgggtgctcgcggaggcgagcccgtccgcgcccgacgccgtgctgctcgcc
cccgcggcggcctcgctggacatgttcgccggatacggcgcgcgcggtgacgctttcgcc
gccgccgcgcgtcggatcgccggctcgcccgacaccggacgctga
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