Gordonia sp. SMJS1: QAD21_15180
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Entry
QAD21_15180 CDS
T10225
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03030
DNA replication
gos03430
Mismatch repair
gos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QAD21_15180
03430 Mismatch repair
QAD21_15180
03440 Homologous recombination
QAD21_15180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gos03032
]
QAD21_15180
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_15180
Enzymes [BR:
gos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QAD21_15180
DNA replication proteins [BR:
gos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QAD21_15180
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QAD21_15180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
WGJ84134
LinkDB
All DBs
Position
3344150..3345952
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AA seq
600 aa
AA seq
DB search
MTQTSVDGSPAGQLTFADLEAADQGATGETTNEFSDRSLFETTLVVVDLETTGSDPVRDR
ITEIGAVKIRGGEVVGEFATLVDPGRPIPPQIVTLTGITTAMLTDAPRIESVLPSFFEFA
RGSILVAHNARFDMGFLRQNAIRLHLPWTFSLSLCTVTMARRILSRDEAPTVKLSALADL
FDVSVRPTHRALDDARATVEVFHRLLERVGNQGIATVGELTSYLPKTDPRLRAKRALADH
VPARPGVYLFRGPSNEVLYVGTAVDLRRRVRSYFSGNDPRRRIAEMVLLAQRVDVVECSH
ALEAAVRERRLLGAHAPAYNRRSTQPHKGWWVTLTEERFPRLKVSRTPTDESIGPVGNRN
NAATVADVISAAAGLRTCTTRLGATGYHWCPEADGRRRPGSCRAATAQPQTVPDYSPRVT
AARRLMRGEADELLDGLTARLTDLAKAHMFETAARHRDRLALTIDALARCQRLAALCAIA
EIVVARPDGERGWQFAVIRHGRLAAAGRARRGVSPMPVVDALVAAAETVLPGPGPLRGAP
AEEVGLVYRWMTEPGARIVSTSEPVALPAGCAERRLGWSQSAHDARAARPVADSRTRQAS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagaccagcgtggacggctcgcccgcggggcagctcaccttcgccgacctggag
gccgccgaccagggggccacgggtgagacgacgaacgaattcagcgaccggtcgctcttc
gagacgaccctcgtcgtcgtcgacctcgagaccaccgggtccgacccggtccgcgaccgg
atcaccgagatcggcgcggtcaagatccgcggcggcgaggtggtcggcgagttcgccacg
ctggtcgaccccggccggccgatccccccgcagatcgtgaccctcaccggcatcaccacc
gcgatgctgaccgacgccccccggatcgagtcggtgctgccgtcgttcttcgagttcgcc
cgcggctcgatcctggtggcccacaacgctcgtttcgacatgggtttccttcggcagaac
gcgatccggctccacctgccgtggacgttcagcctcagcctgtgcacggtgaccatggcc
cggcgcatcctcagccgtgacgaggcgccgacggtcaagctcagcgcgctcgccgacctg
ttcgacgtctccgtgcggcccacccaccgggcgctcgacgatgcgcgcgccacggtggag
gtcttccaccggctcctcgagcgcgtcggcaatcagggcatcgcgaccgtcggcgagctg
acgtcgtatctcccgaagaccgacccgcgcctgcgcgccaaacgcgcactcgccgaccat
gtcccggcccgtcccggggtgtacctgttccgcggcccgtcgaacgaggtcctctacgtg
ggcaccgcggtggacctccgccgccgggtccggtcgtacttcagtggcaacgacccgcgc
cgccgcatcgcggagatggtgctcctcgcccaacgggtcgacgtcgtggagtgttcccac
gccctggaggccgccgtccgcgaacgccggctcctcggcgcgcacgcaccggcgtacaac
cgacgatcgacccagccgcacaagggttggtgggtgaccctgaccgaggaacgcttcccc
cggctcaaggtcagccgaacacccaccgacgagtcgatcggcccggtgggcaaccgcaac
aacgcggcgaccgtcgccgacgtgatctcggcggccgccggtctgcgcacgtgcacgaca
cggctcggcgcgacgggctaccactggtgtcccgaggccgatgggaggcggcggccgggg
tcctgccgggcggccacggcgcagccgcagacggtgccggactactctccccgggtcacc
gcggcccgccggctcatgcgaggtgaggccgacgagctcctcgacggcctcaccgcgcgc
ctcaccgacctcgccaaggcgcacatgttcgagaccgcggcgcggcatcgggaccgtctc
gcgctcacgatcgacgccctcgcccgctgccagcgactggccgcgctgtgcgcgatcgcc
gagatcgtggtcgcccggcccgacggtgaacgcggttggcagttcgcggtcatccggcac
ggacggctcgccgccgccgggcgcgcccgacgcggcgtctcgcccatgcccgtcgtcgac
gcgctcgtcgcggccgcggagaccgtgttaccgggccccggtccgctgcggggcgcgccg
gccgaggaggtcggcctcgtgtaccgctggatgaccgaaccgggcgcgcgcatcgtgtcg
acgagtgagccggtcgccctgcccgccggctgcgccgaacgccggctcggctggtcgcag
tcggcgcacgacgcacgtgcggccagacccgtcgccgactctcgcacacggcaggcgagc
tga
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