Gordonia sp. SMJS1: QAD21_16145
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Entry
QAD21_16145 CDS
T10225
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
gos Gordonia sp. SMJS1
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gos03032
]
QAD21_16145
03036 Chromosome and associated proteins [BR:
gos03036
]
QAD21_16145
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_16145
DNA replication proteins [BR:
gos03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QAD21_16145
Chromosome and associated proteins [BR:
gos03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QAD21_16145
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QAD21_16145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
WGJ84312
LinkDB
All DBs
Position
complement(3534516..3535091)
Genome browser
AA seq
191 aa
AA seq
DB search
MNKAELIDELTKKLDADRKTATEAVELVVDTIVRAVNKGESVTITGFGVFEKRKRAPRVA
RNPRTGETVKVRATSVPAFRPGAQFKAVVAGKQKLSATGPAVKRGSGATTTAAKKAAPAK
KTAAKKTTAAAKKTTAAKKAPAKTTAAKKTTAAKKAPAKKAAPAKKATAAKKAPAKKAAA
KKTAAKKTTRR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggagctcattgatgagctgaccaagaagctcgacgcggatcgcaagact
gcgactgaagccgtcgagctcgtcgtcgacacgatcgtgcgcgcggtcaacaagggcgag
agcgtgacgatcaccggcttcggcgtattcgagaagcggaagcgcgcaccgcgcgtcgcc
cgtaacccgcgcaccggcgagaccgtcaaggtccgcgcgacctcggtgccggcgttccgt
ccgggcgctcagttcaaagccgttgtggcgggcaagcagaagctgtccgcgaccggtccg
gctgtgaagcgcggaagcggagccaccaccacggcagccaagaaggctgcgccggcgaag
aagaccgccgccaagaagacgaccgccgccgccaagaagaccacggcggccaagaaggct
ccggcgaagaccacggcggccaagaagaccaccgcggcgaagaaggctccggccaagaag
gcggcgccggccaagaaggccaccgcggcgaagaaggctccggccaagaaggctgccgcg
aagaagaccgcggcgaagaagaccacccgtcgctga
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