Gordonia sp. SMJS1: QAD21_17950
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Entry
QAD21_17950 CDS
T10225
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gos Gordonia sp. SMJS1
Pathway
gos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QAD21_17950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gos03021
]
QAD21_17950
03400 DNA repair and recombination proteins [BR:
gos03400
]
QAD21_17950
Enzymes [BR:
gos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QAD21_17950
Transcription machinery [BR:
gos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QAD21_17950
DNA repair and recombination proteins [BR:
gos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QAD21_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WGJ84619
LinkDB
All DBs
Position
complement(3906264..3907316)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEEVLAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVAGVKEDVTDIILNLKGLVVSSDEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFSLPIEDLELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSEDASFDADSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggaagtcctcgccgagaaccgctcgaag
ttcgtcatcgagccgctcgagccgggcttcggctacaccctcggcaactcgctgcgtcgt
accctgctcagctcgatcccgggtgcagccatcaccagcatccgcatcgacggtgtcctc
cacgagttcaccaccgtggccggggtcaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtggtcagctcggacgaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggtgccgacatcgtgcccccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctgaacgacaagggcaagctcgagatcgagctcgtcgtc
gagcggggccgcggatacgtcccggccgtgcagaacaaggcgtcgggtgccgagatcggc
cgcatcccggtcgactcgatctactcgccggtgctcaaggtgacctacaaggtcgaggcc
acccgtgtcgaacagcgcaccgacttcgatcgactggtgctcgatgtggagaccaagaac
tcgatcagtgcgcgtgacgcgctggcatcggcgggcaagaccctggtggagctgttcggc
ctcgcccgggagctcaacgtcgaggccgagggcatcgagatcgggccgtcgccggccgag
gccgaccacatcgcgtcgttcagcctgccgatcgaggatctcgagctgaccgttcgttcc
tacaactgcctcaagcgcgagggtgtgcacaccgtcggcgagctggttgcacggaccgag
tcggatctgctcgacatccgcaacttcggtcagaagtcgatcgacgaggtcaaggtcaag
ctgcacgcgctcggtctgtccctcaaggacagcccggccagcttcgatccgtcgcaggtc
gcgggttacgacccggccaccggcacgtggtcggaagacgcgtccttcgacgccgattcc
ggtgaggatttcgcggagaccgagcagctgtag
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