Gemella sp. oral taxon 928: AXE85_03425
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Entry
AXE85_03425 CDS
T04256
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
got
Gemella sp. oral taxon 928
Brite
KEGG Orthology (KO) [BR:
got00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
got03016
]
AXE85_03425 (truB)
Enzymes [BR:
got01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXE85_03425 (truB)
Transfer RNA biogenesis [BR:
got03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXE85_03425 (truB)
Prokaryotic type
AXE85_03425 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AME09268
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All DBs
Position
758907..759830
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AA seq
307 aa
AA seq
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MYNGILPIYKERGMTSHDVVFKARKILQMKKIGHAGTLDPEVDGVLLLLLGGATKVSDYA
MNLGKSYRAEICLGVQTTTEDLTGEIVKEQKVTDVNIADIKEKLMTMVGKIEQIPPIYSA
VKVKGKKLYEYARIGKFDVKIPSRTVNIFNIDFIDGSEYYKDGRYYFSLDISCGKGTYIR
TIATQIGALLNIPSTMSKLTRTRSGKIGVDDCLKLSEVELAIKEGNLIKYLLPKEYALEE
YQFLELPMCRAKQVMNGLRFRKEQFPDYDFSTSVVFTYNKEAIAVYYLKHSEDELLSVKT
IFPKIIE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatggtatcctaccaatctataaggagcgtggaatgacaagccatgatgtggtt
tttaaagcaagaaaaatattgcagatgaaaaagataggtcatgccggtacattagatcct
gaagtggatggagttcttttattactattaggcggtgcaactaaggttagtgattatgct
atgaatttaggtaaaagttaccgtgcggaaatttgtttaggagtacaaacaacaacggaa
gatttaaccggtgaaattgtaaaagagcagaaggtaaccgatgtaaatatagcggacatt
aaggaaaaacttatgactatggttggcaaaatagagcaaataccacctatatattcagcc
gtcaaggtcaaaggaaagaaactatatgaatatgcacgaattgggaaatttgatgtaaaa
ataccaagccgaacggtaaatattttcaatattgattttatagatggcagtgagtattac
aaagatggacgatattatttttcacttgatattagttgtggaaaaggaacgtatataaga
acgatagcaacacaaatcggtgcgttattaaatattcctagtacaatgagtaaattaaca
aggacacggagtgggaaaataggtgttgatgattgtttaaaattatcagaagtagaactt
gcaataaaagaagggaatttaataaaatatttattaccaaaagaatatgcattggaagaa
tatcaatttttagaacttccgatgtgtcgtgctaagcaagtaatgaatggcttgcgtttt
agaaaagagcaattccccgattatgatttttcaacgtctgtggtatttacttataacaaa
gaagcgatagcggtatactatttaaaacatagtgaagatgaattgttatcggtaaaaacg
atatttccgaagataatagagtag
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