Gemella sp. oral taxon 928: AXE85_03955
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Entry
AXE85_03955 CDS
T04256
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
got
Gemella sp. oral taxon 928
Brite
KEGG Orthology (KO) [BR:
got00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
got03032
]
AXE85_03955
03036 Chromosome and associated proteins [BR:
got03036
]
AXE85_03955
03400 DNA repair and recombination proteins [BR:
got03400
]
AXE85_03955
DNA replication proteins [BR:
got03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AXE85_03955
Chromosome and associated proteins [BR:
got03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AXE85_03955
DNA repair and recombination proteins [BR:
got03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AXE85_03955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Baseplate_J
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AME09359
LinkDB
All DBs
Position
880301..880573
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELISKVAEKSGLQKKQATAAIEAFVETVEETLAKGEKIQIIGFGNFEVRERAARKG
RNPQTNEVIEIAASKVPAFKAGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagaattaatttcaaaagtagctgagaaatcaggactacaaaaaaaacaa
gcaactgcagctatcgaagcattcgtagaaacagttgaagaaactctagctaaaggtgaa
aaaattcaaattattggatttggtaactttgaagtaagagaaagagctgctcgtaaaggt
cgtaacccacaaactaatgaagtaattgaaattgcagctagtaaagtacctgcattcaaa
gctggtaaagcacttaaagatgcagtaaaataa
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